Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a20aQ8VDB9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.32■■□□□ 1
Slc6a20aQ8VDB9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Slc6a20aQ8VDB9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.32■■□□□ 1
Slc6a20aQ8VDB9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slc6a20aQ8VDB9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a20aQ8VDB9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slc6a20aQ8VDB9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a20aQ8VDB9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a20aQ8VDB9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a20aQ8VDB9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc6a20aQ8VDB9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a20aQ8VDB9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a20aQ8VDB9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc6a20aQ8VDB9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a20aQ8VDB9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.3■■□□□ 1
Slc6a20aQ8VDB9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a20aQ8VDB9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a20aQ8VDB9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Slc6a20aQ8VDB9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a20aQ8VDB9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a20aQ8VDB9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Slc6a20aQ8VDB9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a20aQ8VDB9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a20aQ8VDB9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20aQ8VDB9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20aQ8VDB9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.29■■□□□ 1
Slc6a20aQ8VDB9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20aQ8VDB9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Slc6a20aQ8VDB9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20aQ8VDB9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20aQ8VDB9 Gm14523-201ENSMUST00000117260 558 ntBASIC21.29■■□□□ 1
Slc6a20aQ8VDB9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20aQ8VDB9 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.29■■□□□ 1
Slc6a20aQ8VDB9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20aQ8VDB9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc6a20aQ8VDB9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a20aQ8VDB9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a20aQ8VDB9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a20aQ8VDB9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a20aQ8VDB9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc6a20aQ8VDB9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a20aQ8VDB9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a20aQ8VDB9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a20aQ8VDB9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Slc6a20aQ8VDB9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.27■■□□□ 1
Slc6a20aQ8VDB9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a20aQ8VDB9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.27■■□□□ 1
Slc6a20aQ8VDB9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Slc6a20aQ8VDB9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20aQ8VDB9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20aQ8VDB9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20aQ8VDB9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20aQ8VDB9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20aQ8VDB9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20aQ8VDB9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.26■□□□□ 0.99
Slc6a20aQ8VDB9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20aQ8VDB9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20aQ8VDB9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Slc6a20aQ8VDB9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.24■□□□□ 0.99
Slc6a20aQ8VDB9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Slc6a20aQ8VDB9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a20aQ8VDB9 Gm7332-201ENSMUST00000118351 454 ntBASIC21.24■□□□□ 0.99
Slc6a20aQ8VDB9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.24■□□□□ 0.99
Slc6a20aQ8VDB9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a20aQ8VDB9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a20aQ8VDB9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a20aQ8VDB9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a20aQ8VDB9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20aQ8VDB9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Slc6a20aQ8VDB9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20aQ8VDB9 Mir6538-201ENSMUST00000183713 110 ntBASIC21.23■□□□□ 0.99
Slc6a20aQ8VDB9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20aQ8VDB9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20aQ8VDB9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20aQ8VDB9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20aQ8VDB9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.23■□□□□ 0.99
Slc6a20aQ8VDB9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a20aQ8VDB9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Slc6a20aQ8VDB9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a20aQ8VDB9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a20aQ8VDB9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Slc6a20aQ8VDB9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.22■□□□□ 0.99
Slc6a20aQ8VDB9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a20aQ8VDB9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a20aQ8VDB9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms