Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3kbp1Q8R550 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
Sh3kbp1Q8R550 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Sh3kbp1Q8R550 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3kbp1Q8R550 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.21■■□□□ 1.15
Sh3kbp1Q8R550 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3kbp1Q8R550 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3kbp1Q8R550 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3kbp1Q8R550 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3kbp1Q8R550 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3kbp1Q8R550 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sh3kbp1Q8R550 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Sh3kbp1Q8R550 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Sh3kbp1Q8R550 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sh3kbp1Q8R550 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sh3kbp1Q8R550 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Sh3kbp1Q8R550 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.19■■□□□ 1.14
Sh3kbp1Q8R550 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Sh3kbp1Q8R550 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sh3kbp1Q8R550 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.19■■□□□ 1.14
Sh3kbp1Q8R550 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.19■■□□□ 1.14
Sh3kbp1Q8R550 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sh3kbp1Q8R550 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sh3kbp1Q8R550 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sh3kbp1Q8R550 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sh3kbp1Q8R550 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Sh3kbp1Q8R550 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.18■■□□□ 1.14
Sh3kbp1Q8R550 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sh3kbp1Q8R550 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sh3kbp1Q8R550 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sh3kbp1Q8R550 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.18■■□□□ 1.14
Sh3kbp1Q8R550 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sh3kbp1Q8R550 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Sh3kbp1Q8R550 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Sh3kbp1Q8R550 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sh3kbp1Q8R550 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sh3kbp1Q8R550 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.18■■□□□ 1.14
Sh3kbp1Q8R550 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sh3kbp1Q8R550 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.17■■□□□ 1.14
Sh3kbp1Q8R550 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sh3kbp1Q8R550 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sh3kbp1Q8R550 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.17■■□□□ 1.14
Sh3kbp1Q8R550 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.17■■□□□ 1.14
Sh3kbp1Q8R550 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Sh3kbp1Q8R550 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sh3kbp1Q8R550 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Sh3kbp1Q8R550 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Sh3kbp1Q8R550 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
Sh3kbp1Q8R550 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.15■■□□□ 1.14
Sh3kbp1Q8R550 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Sh3kbp1Q8R550 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3kbp1Q8R550 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3kbp1Q8R550 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3kbp1Q8R550 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3kbp1Q8R550 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3kbp1Q8R550 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3kbp1Q8R550 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sh3kbp1Q8R550 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
Sh3kbp1Q8R550 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Sh3kbp1Q8R550 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sh3kbp1Q8R550 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sh3kbp1Q8R550 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sh3kbp1Q8R550 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Sh3kbp1Q8R550 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sh3kbp1Q8R550 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Sh3kbp1Q8R550 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Sh3kbp1Q8R550 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.13■■□□□ 1.13
Sh3kbp1Q8R550 Rps24-207ENSMUST00000224568 714 ntBASIC22.13■■□□□ 1.13
Sh3kbp1Q8R550 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sh3kbp1Q8R550 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Sh3kbp1Q8R550 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Sh3kbp1Q8R550 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.12■■□□□ 1.13
Sh3kbp1Q8R550 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sh3kbp1Q8R550 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sh3kbp1Q8R550 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sh3kbp1Q8R550 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sh3kbp1Q8R550 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sh3kbp1Q8R550 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sh3kbp1Q8R550 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sh3kbp1Q8R550 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sh3kbp1Q8R550 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sh3kbp1Q8R550 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sh3kbp1Q8R550 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3kbp1Q8R550 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3kbp1Q8R550 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3kbp1Q8R550 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3kbp1Q8R550 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Sh3kbp1Q8R550 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3kbp1Q8R550 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3kbp1Q8R550 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Sh3kbp1Q8R550 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3kbp1Q8R550 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3kbp1Q8R550 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3kbp1Q8R550 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.08■■□□□ 1.13
Sh3kbp1Q8R550 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3kbp1Q8R550 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3kbp1Q8R550 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3kbp1Q8R550 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3kbp1Q8R550 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3kbp1Q8R550 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms