Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Ptcd2Q8R3K3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ptcd2Q8R3K3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ptcd2Q8R3K3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ptcd2Q8R3K3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
Ptcd2Q8R3K3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ptcd2Q8R3K3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptcd2Q8R3K3 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.32■■□□□ 1.32
Ptcd2Q8R3K3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptcd2Q8R3K3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Ptcd2Q8R3K3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Ptcd2Q8R3K3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ptcd2Q8R3K3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ptcd2Q8R3K3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptcd2Q8R3K3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptcd2Q8R3K3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Ptcd2Q8R3K3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ptcd2Q8R3K3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptcd2Q8R3K3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptcd2Q8R3K3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ptcd2Q8R3K3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
Ptcd2Q8R3K3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptcd2Q8R3K3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptcd2Q8R3K3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ptcd2Q8R3K3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ptcd2Q8R3K3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Ptcd2Q8R3K3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.29■■□□□ 1.32
Ptcd2Q8R3K3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptcd2Q8R3K3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
Ptcd2Q8R3K3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ptcd2Q8R3K3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.28■■□□□ 1.32
Ptcd2Q8R3K3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptcd2Q8R3K3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptcd2Q8R3K3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.28■■□□□ 1.32
Ptcd2Q8R3K3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Ptcd2Q8R3K3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.28■■□□□ 1.32
Ptcd2Q8R3K3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptcd2Q8R3K3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptcd2Q8R3K3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptcd2Q8R3K3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptcd2Q8R3K3 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.27■■□□□ 1.32
Ptcd2Q8R3K3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptcd2Q8R3K3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptcd2Q8R3K3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.26■■□□□ 1.31
Ptcd2Q8R3K3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ptcd2Q8R3K3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ptcd2Q8R3K3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ptcd2Q8R3K3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ptcd2Q8R3K3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ptcd2Q8R3K3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.25■■□□□ 1.31
Ptcd2Q8R3K3 Gm27405-201ENSMUST00000184201 112 ntBASIC23.25■■□□□ 1.31
Ptcd2Q8R3K3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ptcd2Q8R3K3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Ptcd2Q8R3K3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.24■■□□□ 1.31
Ptcd2Q8R3K3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ptcd2Q8R3K3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ptcd2Q8R3K3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
Ptcd2Q8R3K3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ptcd2Q8R3K3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Ptcd2Q8R3K3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Ptcd2Q8R3K3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ptcd2Q8R3K3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ptcd2Q8R3K3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd2Q8R3K3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Ptcd2Q8R3K3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd2Q8R3K3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd2Q8R3K3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd2Q8R3K3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.22■■□□□ 1.31
Ptcd2Q8R3K3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ptcd2Q8R3K3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ptcd2Q8R3K3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Ptcd2Q8R3K3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ptcd2Q8R3K3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ptcd2Q8R3K3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd2Q8R3K3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd2Q8R3K3 Gm26571-201ENSMUST00000181399 666 ntBASIC23.21■■□□□ 1.31
Ptcd2Q8R3K3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.21■■□□□ 1.31
Ptcd2Q8R3K3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd2Q8R3K3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd2Q8R3K3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd2Q8R3K3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd2Q8R3K3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd2Q8R3K3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd2Q8R3K3 Gm43017-201ENSMUST00000198296 752 ntBASIC23.2■■□□□ 1.3
Ptcd2Q8R3K3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd2Q8R3K3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptcd2Q8R3K3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptcd2Q8R3K3 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.19■■□□□ 1.3
Ptcd2Q8R3K3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.19■■□□□ 1.3
Ptcd2Q8R3K3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
Ptcd2Q8R3K3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Ptcd2Q8R3K3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptcd2Q8R3K3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptcd2Q8R3K3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptcd2Q8R3K3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.18■■□□□ 1.3
Ptcd2Q8R3K3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptcd2Q8R3K3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
Ptcd2Q8R3K3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.17■■□□□ 1.3
Ptcd2Q8R3K3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Ptcd2Q8R3K3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms