Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r38Q8R2E1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Vmn1r38Q8R2E1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r38Q8R2E1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r38Q8R2E1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r38Q8R2E1 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.24■□□□□ 0.83
Vmn1r38Q8R2E1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r38Q8R2E1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r38Q8R2E1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r38Q8R2E1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r38Q8R2E1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r38Q8R2E1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r38Q8R2E1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r38Q8R2E1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r38Q8R2E1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r38Q8R2E1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r38Q8R2E1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r38Q8R2E1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r38Q8R2E1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r38Q8R2E1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.22■□□□□ 0.83
Vmn1r38Q8R2E1 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.22■□□□□ 0.83
Vmn1r38Q8R2E1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Vmn1r38Q8R2E1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r38Q8R2E1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r38Q8R2E1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Vmn1r38Q8R2E1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Vmn1r38Q8R2E1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.21■□□□□ 0.83
Vmn1r38Q8R2E1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r38Q8R2E1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.21■□□□□ 0.83
Vmn1r38Q8R2E1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r38Q8R2E1 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.21■□□□□ 0.83
Vmn1r38Q8R2E1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r38Q8R2E1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.2■□□□□ 0.82
Vmn1r38Q8R2E1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.2■□□□□ 0.82
Vmn1r38Q8R2E1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Vmn1r38Q8R2E1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Vmn1r38Q8R2E1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r38Q8R2E1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r38Q8R2E1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r38Q8R2E1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r38Q8R2E1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r38Q8R2E1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.19■□□□□ 0.82
Vmn1r38Q8R2E1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r38Q8R2E1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.19■□□□□ 0.82
Vmn1r38Q8R2E1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r38Q8R2E1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Vmn1r38Q8R2E1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Vmn1r38Q8R2E1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r38Q8R2E1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Vmn1r38Q8R2E1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r38Q8R2E1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r38Q8R2E1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r38Q8R2E1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Vmn1r38Q8R2E1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r38Q8R2E1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r38Q8R2E1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r38Q8R2E1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r38Q8R2E1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r38Q8R2E1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Vmn1r38Q8R2E1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r38Q8R2E1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Vmn1r38Q8R2E1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Vmn1r38Q8R2E1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Vmn1r38Q8R2E1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Vmn1r38Q8R2E1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r38Q8R2E1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r38Q8R2E1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Vmn1r38Q8R2E1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r38Q8R2E1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r38Q8R2E1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r38Q8R2E1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.15■□□□□ 0.82
Vmn1r38Q8R2E1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r38Q8R2E1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.15■□□□□ 0.82
Vmn1r38Q8R2E1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Vmn1r38Q8R2E1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r38Q8R2E1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r38Q8R2E1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r38Q8R2E1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vmn1r38Q8R2E1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Vmn1r38Q8R2E1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r38Q8R2E1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Vmn1r38Q8R2E1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r38Q8R2E1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r38Q8R2E1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r38Q8R2E1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Vmn1r38Q8R2E1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r38Q8R2E1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.13■□□□□ 0.81
Vmn1r38Q8R2E1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r38Q8R2E1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r38Q8R2E1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Vmn1r38Q8R2E1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r38Q8R2E1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r38Q8R2E1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.12■□□□□ 0.81
Vmn1r38Q8R2E1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Vmn1r38Q8R2E1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r38Q8R2E1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r38Q8R2E1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Vmn1r38Q8R2E1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Vmn1r38Q8R2E1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r38Q8R2E1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms