Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.84■□□□□ 0.77
Vmn1r28Q8R2C9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vmn1r28Q8R2C9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vmn1r28Q8R2C9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.83■□□□□ 0.77
Vmn1r28Q8R2C9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vmn1r28Q8R2C9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Vmn1r28Q8R2C9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vmn1r28Q8R2C9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vmn1r28Q8R2C9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vmn1r28Q8R2C9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vmn1r28Q8R2C9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vmn1r28Q8R2C9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vmn1r28Q8R2C9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Vmn1r28Q8R2C9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vmn1r28Q8R2C9 Gm22567-201ENSMUST00000175542 342 ntBASIC19.81■□□□□ 0.76
Vmn1r28Q8R2C9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.81■□□□□ 0.76
Vmn1r28Q8R2C9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vmn1r28Q8R2C9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vmn1r28Q8R2C9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vmn1r28Q8R2C9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Vmn1r28Q8R2C9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vmn1r28Q8R2C9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vmn1r28Q8R2C9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vmn1r28Q8R2C9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vmn1r28Q8R2C9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Vmn1r28Q8R2C9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vmn1r28Q8R2C9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r28Q8R2C9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vmn1r28Q8R2C9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vmn1r28Q8R2C9 Gm13238-201ENSMUST00000117655 780 ntBASIC19.78■□□□□ 0.76
Vmn1r28Q8R2C9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vmn1r28Q8R2C9 Gm45444-201ENSMUST00000211394 898 ntBASIC19.78■□□□□ 0.76
Vmn1r28Q8R2C9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vmn1r28Q8R2C9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vmn1r28Q8R2C9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vmn1r28Q8R2C9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vmn1r28Q8R2C9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Vmn1r28Q8R2C9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Vmn1r28Q8R2C9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.77■□□□□ 0.76
Vmn1r28Q8R2C9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vmn1r28Q8R2C9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Vmn1r28Q8R2C9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vmn1r28Q8R2C9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vmn1r28Q8R2C9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vmn1r28Q8R2C9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vmn1r28Q8R2C9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vmn1r28Q8R2C9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Vmn1r28Q8R2C9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Vmn1r28Q8R2C9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vmn1r28Q8R2C9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vmn1r28Q8R2C9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vmn1r28Q8R2C9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Vmn1r28Q8R2C9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vmn1r28Q8R2C9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmn1r28Q8R2C9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Vmn1r28Q8R2C9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vmn1r28Q8R2C9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Vmn1r28Q8R2C9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmn1r28Q8R2C9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vmn1r28Q8R2C9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Vmn1r28Q8R2C9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r28Q8R2C9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Vmn1r28Q8R2C9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Vmn1r28Q8R2C9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.73■□□□□ 0.75
Vmn1r28Q8R2C9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r28Q8R2C9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r28Q8R2C9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r28Q8R2C9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r28Q8R2C9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r28Q8R2C9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r28Q8R2C9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r28Q8R2C9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r28Q8R2C9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r28Q8R2C9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.72■□□□□ 0.75
Vmn1r28Q8R2C9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.72■□□□□ 0.75
Vmn1r28Q8R2C9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r28Q8R2C9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r28Q8R2C9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vmn1r28Q8R2C9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vmn1r28Q8R2C9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vmn1r28Q8R2C9 Gm43566-201ENSMUST00000196851 808 ntBASIC19.71■□□□□ 0.75
Vmn1r28Q8R2C9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
Vmn1r28Q8R2C9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.71■□□□□ 0.75
Vmn1r28Q8R2C9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vmn1r28Q8R2C9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Vmn1r28Q8R2C9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vmn1r28Q8R2C9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vmn1r28Q8R2C9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 386.8 ms