Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf4Q8K4J2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf4Q8K4J2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf4Q8K4J2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf4Q8K4J2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ebf4Q8K4J2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ebf4Q8K4J2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf4Q8K4J2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf4Q8K4J2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf4Q8K4J2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf4Q8K4J2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf4Q8K4J2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf4Q8K4J2 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.68■□□□□ 0.74
Ebf4Q8K4J2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ebf4Q8K4J2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ebf4Q8K4J2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.68■□□□□ 0.74
Ebf4Q8K4J2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.68■□□□□ 0.74
Ebf4Q8K4J2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf4Q8K4J2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf4Q8K4J2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf4Q8K4J2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf4Q8K4J2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf4Q8K4J2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf4Q8K4J2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf4Q8K4J2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.66■□□□□ 0.74
Ebf4Q8K4J2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.66■□□□□ 0.74
Ebf4Q8K4J2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf4Q8K4J2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf4Q8K4J2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf4Q8K4J2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf4Q8K4J2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf4Q8K4J2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf4Q8K4J2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf4Q8K4J2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf4Q8K4J2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf4Q8K4J2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ebf4Q8K4J2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ebf4Q8K4J2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ebf4Q8K4J2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ebf4Q8K4J2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ebf4Q8K4J2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ebf4Q8K4J2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ebf4Q8K4J2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf4Q8K4J2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf4Q8K4J2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf4Q8K4J2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf4Q8K4J2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf4Q8K4J2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf4Q8K4J2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf4Q8K4J2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf4Q8K4J2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf4Q8K4J2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf4Q8K4J2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf4Q8K4J2 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.62■□□□□ 0.73
Ebf4Q8K4J2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf4Q8K4J2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf4Q8K4J2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf4Q8K4J2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf4Q8K4J2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf4Q8K4J2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf4Q8K4J2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf4Q8K4J2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf4Q8K4J2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ebf4Q8K4J2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf4Q8K4J2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ebf4Q8K4J2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf4Q8K4J2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf4Q8K4J2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf4Q8K4J2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ebf4Q8K4J2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.6■□□□□ 0.73
Ebf4Q8K4J2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf4Q8K4J2 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.59■□□□□ 0.73
Ebf4Q8K4J2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf4Q8K4J2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf4Q8K4J2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf4Q8K4J2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ebf4Q8K4J2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf4Q8K4J2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ebf4Q8K4J2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ebf4Q8K4J2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ebf4Q8K4J2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Ebf4Q8K4J2 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.58■□□□□ 0.73
Ebf4Q8K4J2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ebf4Q8K4J2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ebf4Q8K4J2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Ebf4Q8K4J2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf4Q8K4J2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf4Q8K4J2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf4Q8K4J2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf4Q8K4J2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf4Q8K4J2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf4Q8K4J2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf4Q8K4J2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf4Q8K4J2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf4Q8K4J2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf4Q8K4J2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ebf4Q8K4J2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ebf4Q8K4J2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ebf4Q8K4J2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ebf4Q8K4J2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms