Protein–RNA interactions for Protein: Q8K194

Snrnp27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp27Q8K194 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrnp27Q8K194 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrnp27Q8K194 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrnp27Q8K194 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Snrnp27Q8K194 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrnp27Q8K194 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrnp27Q8K194 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Snrnp27Q8K194 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp27Q8K194 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp27Q8K194 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp27Q8K194 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp27Q8K194 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.17■□□□□ 0.98
Snrnp27Q8K194 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp27Q8K194 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp27Q8K194 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp27Q8K194 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Snrnp27Q8K194 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Snrnp27Q8K194 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Snrnp27Q8K194 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Snrnp27Q8K194 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Snrnp27Q8K194 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Snrnp27Q8K194 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snrnp27Q8K194 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Snrnp27Q8K194 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Snrnp27Q8K194 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Snrnp27Q8K194 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Snrnp27Q8K194 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Snrnp27Q8K194 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Snrnp27Q8K194 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Snrnp27Q8K194 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Snrnp27Q8K194 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Snrnp27Q8K194 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snrnp27Q8K194 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snrnp27Q8K194 Gm13238-201ENSMUST00000117655 780 ntBASIC21.12■□□□□ 0.97
Snrnp27Q8K194 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.12■□□□□ 0.97
Snrnp27Q8K194 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.12■□□□□ 0.97
Snrnp27Q8K194 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snrnp27Q8K194 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Snrnp27Q8K194 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Snrnp27Q8K194 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.11■□□□□ 0.97
Snrnp27Q8K194 Gm15820-201ENSMUST00000201566 728 ntBASIC21.11■□□□□ 0.97
Snrnp27Q8K194 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Snrnp27Q8K194 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Snrnp27Q8K194 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Snrnp27Q8K194 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.1■□□□□ 0.97
Snrnp27Q8K194 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Snrnp27Q8K194 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.1■□□□□ 0.97
Snrnp27Q8K194 Gm44428-201ENSMUST00000204474 874 ntBASIC21.1■□□□□ 0.97
Snrnp27Q8K194 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Snrnp27Q8K194 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Snrnp27Q8K194 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Snrnp27Q8K194 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Snrnp27Q8K194 Gm45444-201ENSMUST00000211394 898 ntBASIC21.09■□□□□ 0.97
Snrnp27Q8K194 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Snrnp27Q8K194 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Snrnp27Q8K194 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Snrnp27Q8K194 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
Snrnp27Q8K194 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Snrnp27Q8K194 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Snrnp27Q8K194 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Snrnp27Q8K194 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Snrnp27Q8K194 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.08■□□□□ 0.97
Snrnp27Q8K194 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.08■□□□□ 0.97
Snrnp27Q8K194 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Snrnp27Q8K194 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Snrnp27Q8K194 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Snrnp27Q8K194 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Snrnp27Q8K194 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Snrnp27Q8K194 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.07■□□□□ 0.96
Snrnp27Q8K194 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.07■□□□□ 0.96
Snrnp27Q8K194 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Snrnp27Q8K194 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Snrnp27Q8K194 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Snrnp27Q8K194 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Snrnp27Q8K194 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snrnp27Q8K194 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snrnp27Q8K194 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Snrnp27Q8K194 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.05■□□□□ 0.96
Snrnp27Q8K194 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.05■□□□□ 0.96
Snrnp27Q8K194 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snrnp27Q8K194 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Snrnp27Q8K194 Gm14117-201ENSMUST00000122417 843 ntBASIC21.04■□□□□ 0.96
Snrnp27Q8K194 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.04■□□□□ 0.96
Snrnp27Q8K194 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Snrnp27Q8K194 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.04■□□□□ 0.96
Snrnp27Q8K194 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Snrnp27Q8K194 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snrnp27Q8K194 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snrnp27Q8K194 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Snrnp27Q8K194 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.03■□□□□ 0.96
Snrnp27Q8K194 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.03■□□□□ 0.96
Snrnp27Q8K194 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snrnp27Q8K194 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Snrnp27Q8K194 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snrnp27Q8K194 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Snrnp27Q8K194 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snrnp27Q8K194 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snrnp27Q8K194 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snrnp27Q8K194 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Snrnp27Q8K194 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms