Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab43Q8CG50 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab43Q8CG50 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.16■□□□□ 0.98
Rab43Q8CG50 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab43Q8CG50 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rab43Q8CG50 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.16■□□□□ 0.98
Rab43Q8CG50 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab43Q8CG50 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rab43Q8CG50 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rab43Q8CG50 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rab43Q8CG50 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.15■□□□□ 0.98
Rab43Q8CG50 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rab43Q8CG50 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Rab43Q8CG50 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.15■□□□□ 0.98
Rab43Q8CG50 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rab43Q8CG50 Gm40881-201ENSMUST00000223397 166 ntBASIC21.15■□□□□ 0.98
Rab43Q8CG50 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Rab43Q8CG50 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.15■□□□□ 0.98
Rab43Q8CG50 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.15■□□□□ 0.98
Rab43Q8CG50 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rab43Q8CG50 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rab43Q8CG50 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab43Q8CG50 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab43Q8CG50 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.14■□□□□ 0.97
Rab43Q8CG50 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab43Q8CG50 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab43Q8CG50 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab43Q8CG50 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab43Q8CG50 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rab43Q8CG50 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab43Q8CG50 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab43Q8CG50 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rab43Q8CG50 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.12■□□□□ 0.97
Rab43Q8CG50 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rab43Q8CG50 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rab43Q8CG50 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rab43Q8CG50 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rab43Q8CG50 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rab43Q8CG50 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rab43Q8CG50 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.1■□□□□ 0.97
Rab43Q8CG50 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.1■□□□□ 0.97
Rab43Q8CG50 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab43Q8CG50 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rab43Q8CG50 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rab43Q8CG50 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.09■□□□□ 0.97
Rab43Q8CG50 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.09■□□□□ 0.97
Rab43Q8CG50 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rab43Q8CG50 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rab43Q8CG50 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rab43Q8CG50 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rab43Q8CG50 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.08■□□□□ 0.97
Rab43Q8CG50 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rab43Q8CG50 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.08■□□□□ 0.97
Rab43Q8CG50 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.08■□□□□ 0.97
Rab43Q8CG50 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Rab43Q8CG50 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rab43Q8CG50 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rab43Q8CG50 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab43Q8CG50 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rab43Q8CG50 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.07■□□□□ 0.96
Rab43Q8CG50 Gm10399-202ENSMUST00000202768 748 ntBASIC21.07■□□□□ 0.96
Rab43Q8CG50 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab43Q8CG50 Gm13241-201ENSMUST00000094493 780 ntBASIC21.07■□□□□ 0.96
Rab43Q8CG50 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab43Q8CG50 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab43Q8CG50 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rab43Q8CG50 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab43Q8CG50 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.07■□□□□ 0.96
Rab43Q8CG50 Gm22238-201ENSMUST00000175222 88 ntBASIC21.06■□□□□ 0.96
Rab43Q8CG50 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab43Q8CG50 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab43Q8CG50 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab43Q8CG50 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab43Q8CG50 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rab43Q8CG50 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rab43Q8CG50 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.05■□□□□ 0.96
Rab43Q8CG50 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab43Q8CG50 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab43Q8CG50 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab43Q8CG50 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab43Q8CG50 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab43Q8CG50 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.04■□□□□ 0.96
Rab43Q8CG50 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.04■□□□□ 0.96
Rab43Q8CG50 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab43Q8CG50 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rab43Q8CG50 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab43Q8CG50 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab43Q8CG50 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab43Q8CG50 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab43Q8CG50 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rab43Q8CG50 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab43Q8CG50 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab43Q8CG50 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab43Q8CG50 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab43Q8CG50 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab43Q8CG50 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab43Q8CG50 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab43Q8CG50 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab43Q8CG50 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab43Q8CG50 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms