Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Zswim3Q8CFL8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Zswim3Q8CFL8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC24.05■■□□□ 1.44
Zswim3Q8CFL8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Zswim3Q8CFL8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Zswim3Q8CFL8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.04■■□□□ 1.44
Zswim3Q8CFL8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Zswim3Q8CFL8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Zswim3Q8CFL8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.04■■□□□ 1.44
Zswim3Q8CFL8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Zswim3Q8CFL8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Zswim3Q8CFL8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Zswim3Q8CFL8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Zswim3Q8CFL8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Zswim3Q8CFL8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Zswim3Q8CFL8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Zswim3Q8CFL8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Zswim3Q8CFL8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.03■■□□□ 1.44
Zswim3Q8CFL8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.03■■□□□ 1.44
Zswim3Q8CFL8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Zswim3Q8CFL8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Zswim3Q8CFL8 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.02■■□□□ 1.44
Zswim3Q8CFL8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC24.02■■□□□ 1.44
Zswim3Q8CFL8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Zswim3Q8CFL8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Zswim3Q8CFL8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
Zswim3Q8CFL8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Zswim3Q8CFL8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Zswim3Q8CFL8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Zswim3Q8CFL8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Zswim3Q8CFL8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Zswim3Q8CFL8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Zswim3Q8CFL8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24■■□□□ 1.43
Zswim3Q8CFL8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Zswim3Q8CFL8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Zswim3Q8CFL8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24■■□□□ 1.43
Zswim3Q8CFL8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC24■■□□□ 1.43
Zswim3Q8CFL8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24■■□□□ 1.43
Zswim3Q8CFL8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24■■□□□ 1.43
Zswim3Q8CFL8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Zswim3Q8CFL8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Zswim3Q8CFL8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Zswim3Q8CFL8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Zswim3Q8CFL8 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.99■■□□□ 1.43
Zswim3Q8CFL8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Zswim3Q8CFL8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Zswim3Q8CFL8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Zswim3Q8CFL8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Zswim3Q8CFL8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Zswim3Q8CFL8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Zswim3Q8CFL8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Zswim3Q8CFL8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Zswim3Q8CFL8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Zswim3Q8CFL8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Zswim3Q8CFL8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Zswim3Q8CFL8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Zswim3Q8CFL8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
Zswim3Q8CFL8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Zswim3Q8CFL8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Zswim3Q8CFL8 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.96■■□□□ 1.43
Zswim3Q8CFL8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Zswim3Q8CFL8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Zswim3Q8CFL8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.95■■□□□ 1.42
Zswim3Q8CFL8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
Zswim3Q8CFL8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.95■■□□□ 1.42
Zswim3Q8CFL8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.95■■□□□ 1.42
Zswim3Q8CFL8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zswim3Q8CFL8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zswim3Q8CFL8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zswim3Q8CFL8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Zswim3Q8CFL8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.94■■□□□ 1.42
Zswim3Q8CFL8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zswim3Q8CFL8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Zswim3Q8CFL8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zswim3Q8CFL8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zswim3Q8CFL8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Zswim3Q8CFL8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.93■■□□□ 1.42
Zswim3Q8CFL8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.93■■□□□ 1.42
Zswim3Q8CFL8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Zswim3Q8CFL8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC23.93■■□□□ 1.42
Zswim3Q8CFL8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Zswim3Q8CFL8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Zswim3Q8CFL8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Zswim3Q8CFL8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Zswim3Q8CFL8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Zswim3Q8CFL8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Zswim3Q8CFL8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Zswim3Q8CFL8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Zswim3Q8CFL8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Zswim3Q8CFL8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Zswim3Q8CFL8 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.92■■□□□ 1.42
Zswim3Q8CFL8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Zswim3Q8CFL8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Zswim3Q8CFL8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Zswim3Q8CFL8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Zswim3Q8CFL8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Zswim3Q8CFL8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Zswim3Q8CFL8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Zswim3Q8CFL8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Zswim3Q8CFL8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.9■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms