Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd4Q8CC84 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd4Q8CC84 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Lysmd4Q8CC84 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.41■□□□□ 0.7
Lysmd4Q8CC84 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd4Q8CC84 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd4Q8CC84 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Terc-201ENSMUST00000082862 423 ntBASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Lysmd4Q8CC84 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd4Q8CC84 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.38■□□□□ 0.69
Lysmd4Q8CC84 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd4Q8CC84 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd4Q8CC84 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd4Q8CC84 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.37■□□□□ 0.69
Lysmd4Q8CC84 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.37■□□□□ 0.69
Lysmd4Q8CC84 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd4Q8CC84 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd4Q8CC84 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd4Q8CC84 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.36■□□□□ 0.69
Lysmd4Q8CC84 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lysmd4Q8CC84 Mir3960-201ENSMUST00000198213 73 ntBASIC19.36■□□□□ 0.69
Lysmd4Q8CC84 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lysmd4Q8CC84 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd4Q8CC84 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Lysmd4Q8CC84 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
Lysmd4Q8CC84 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Lysmd4Q8CC84 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd4Q8CC84 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Gm45364-201ENSMUST00000210883 159 ntBASIC19.33■□□□□ 0.68
Lysmd4Q8CC84 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd4Q8CC84 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd4Q8CC84 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd4Q8CC84 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd4Q8CC84 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.32■□□□□ 0.68
Lysmd4Q8CC84 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd4Q8CC84 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Lysmd4Q8CC84 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.32■□□□□ 0.68
Lysmd4Q8CC84 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd4Q8CC84 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd4Q8CC84 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lysmd4Q8CC84 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd4Q8CC84 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd4Q8CC84 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd4Q8CC84 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.3■□□□□ 0.68
Lysmd4Q8CC84 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd4Q8CC84 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd4Q8CC84 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd4Q8CC84 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd4Q8CC84 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Notumos-201ENSMUST00000151998 2659 ntBASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd4Q8CC84 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd4Q8CC84 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms