Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lysmd4Q8CC84 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd4Q8CC84 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd4Q8CC84 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Lysmd4Q8CC84 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.41■□□□□ 0.7
Lysmd4Q8CC84 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd4Q8CC84 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd4Q8CC84 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Terc-201ENSMUST00000082862 423 ntBASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Lysmd4Q8CC84 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Lysmd4Q8CC84 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd4Q8CC84 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd4Q8CC84 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.38■□□□□ 0.69
Lysmd4Q8CC84 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd4Q8CC84 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd4Q8CC84 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd4Q8CC84 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.37■□□□□ 0.69
Lysmd4Q8CC84 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.37■□□□□ 0.69
Lysmd4Q8CC84 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd4Q8CC84 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd4Q8CC84 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd4Q8CC84 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.36■□□□□ 0.69
Lysmd4Q8CC84 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lysmd4Q8CC84 Mir3960-201ENSMUST00000198213 73 ntBASIC19.36■□□□□ 0.69
Lysmd4Q8CC84 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lysmd4Q8CC84 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd4Q8CC84 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd4Q8CC84 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Lysmd4Q8CC84 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
Lysmd4Q8CC84 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Lysmd4Q8CC84 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd4Q8CC84 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd4Q8CC84 Gm45364-201ENSMUST00000210883 159 ntBASIC19.33■□□□□ 0.68
Lysmd4Q8CC84 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd4Q8CC84 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd4Q8CC84 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd4Q8CC84 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd4Q8CC84 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.32■□□□□ 0.68
Lysmd4Q8CC84 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd4Q8CC84 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Lysmd4Q8CC84 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.32■□□□□ 0.68
Lysmd4Q8CC84 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd4Q8CC84 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd4Q8CC84 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd4Q8CC84 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lysmd4Q8CC84 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd4Q8CC84 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd4Q8CC84 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd4Q8CC84 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.3■□□□□ 0.68
Lysmd4Q8CC84 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd4Q8CC84 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd4Q8CC84 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd4Q8CC84 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd4Q8CC84 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Notumos-201ENSMUST00000151998 2659 ntBASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd4Q8CC84 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd4Q8CC84 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd4Q8CC84 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms