Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrtm1Q8BXQ3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrtm1Q8BXQ3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lrtm1Q8BXQ3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lrtm1Q8BXQ3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrtm1Q8BXQ3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Lrtm1Q8BXQ3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.89■□□□□ 0.62
Lrtm1Q8BXQ3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrtm1Q8BXQ3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrtm1Q8BXQ3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lrtm1Q8BXQ3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Lrtm1Q8BXQ3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrtm1Q8BXQ3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrtm1Q8BXQ3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrtm1Q8BXQ3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.88■□□□□ 0.61
Lrtm1Q8BXQ3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrtm1Q8BXQ3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrtm1Q8BXQ3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrtm1Q8BXQ3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrtm1Q8BXQ3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrtm1Q8BXQ3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrtm1Q8BXQ3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrtm1Q8BXQ3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lrtm1Q8BXQ3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lrtm1Q8BXQ3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrtm1Q8BXQ3 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.87■□□□□ 0.61
Lrtm1Q8BXQ3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrtm1Q8BXQ3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrtm1Q8BXQ3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrtm1Q8BXQ3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lrtm1Q8BXQ3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrtm1Q8BXQ3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lrtm1Q8BXQ3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrtm1Q8BXQ3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.86■□□□□ 0.61
Lrtm1Q8BXQ3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrtm1Q8BXQ3 Gm5921-201ENSMUST00000075898 882 ntBASIC18.86■□□□□ 0.61
Lrtm1Q8BXQ3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lrtm1Q8BXQ3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrtm1Q8BXQ3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrtm1Q8BXQ3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Lrtm1Q8BXQ3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrtm1Q8BXQ3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrtm1Q8BXQ3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrtm1Q8BXQ3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lrtm1Q8BXQ3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Lrtm1Q8BXQ3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Lrtm1Q8BXQ3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Lrtm1Q8BXQ3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrtm1Q8BXQ3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrtm1Q8BXQ3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrtm1Q8BXQ3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lrtm1Q8BXQ3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Lrtm1Q8BXQ3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.84■□□□□ 0.61
Lrtm1Q8BXQ3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Lrtm1Q8BXQ3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Lrtm1Q8BXQ3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrtm1Q8BXQ3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lrtm1Q8BXQ3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lrtm1Q8BXQ3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lrtm1Q8BXQ3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Lrtm1Q8BXQ3 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.83■□□□□ 0.6
Lrtm1Q8BXQ3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lrtm1Q8BXQ3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.83■□□□□ 0.6
Lrtm1Q8BXQ3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.83■□□□□ 0.6
Lrtm1Q8BXQ3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrtm1Q8BXQ3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrtm1Q8BXQ3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.83■□□□□ 0.6
Lrtm1Q8BXQ3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Lrtm1Q8BXQ3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrtm1Q8BXQ3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrtm1Q8BXQ3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrtm1Q8BXQ3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrtm1Q8BXQ3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrtm1Q8BXQ3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrtm1Q8BXQ3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lrtm1Q8BXQ3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrtm1Q8BXQ3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.81■□□□□ 0.6
Lrtm1Q8BXQ3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lrtm1Q8BXQ3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Lrtm1Q8BXQ3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lrtm1Q8BXQ3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrtm1Q8BXQ3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrtm1Q8BXQ3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrtm1Q8BXQ3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.8■□□□□ 0.6
Lrtm1Q8BXQ3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrtm1Q8BXQ3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrtm1Q8BXQ3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrtm1Q8BXQ3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Lrtm1Q8BXQ3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrtm1Q8BXQ3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lrtm1Q8BXQ3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrtm1Q8BXQ3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrtm1Q8BXQ3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrtm1Q8BXQ3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrtm1Q8BXQ3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lrtm1Q8BXQ3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.79■□□□□ 0.6
Lrtm1Q8BXQ3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lrtm1Q8BXQ3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lrtm1Q8BXQ3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.79■□□□□ 0.6
Lrtm1Q8BXQ3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms