Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Tdp1Q8BJ37 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tdp1Q8BJ37 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Tdp1Q8BJ37 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tdp1Q8BJ37 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tdp1Q8BJ37 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.16■■□□□ 1.46
Tdp1Q8BJ37 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.16■■□□□ 1.46
Tdp1Q8BJ37 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tdp1Q8BJ37 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tdp1Q8BJ37 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tdp1Q8BJ37 Gm22238-201ENSMUST00000175222 88 ntBASIC24.15■■□□□ 1.46
Tdp1Q8BJ37 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.15■■□□□ 1.46
Tdp1Q8BJ37 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tdp1Q8BJ37 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tdp1Q8BJ37 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tdp1Q8BJ37 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC24.14■■□□□ 1.46
Tdp1Q8BJ37 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Tdp1Q8BJ37 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Tdp1Q8BJ37 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Tdp1Q8BJ37 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.14■■□□□ 1.45
Tdp1Q8BJ37 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.14■■□□□ 1.45
Tdp1Q8BJ37 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Tdp1Q8BJ37 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Tdp1Q8BJ37 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tdp1Q8BJ37 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tdp1Q8BJ37 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tdp1Q8BJ37 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Tdp1Q8BJ37 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Tdp1Q8BJ37 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC24.13■■□□□ 1.45
Tdp1Q8BJ37 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Tdp1Q8BJ37 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Tdp1Q8BJ37 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Tdp1Q8BJ37 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tdp1Q8BJ37 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Tdp1Q8BJ37 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tdp1Q8BJ37 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tdp1Q8BJ37 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tdp1Q8BJ37 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tdp1Q8BJ37 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tdp1Q8BJ37 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.11■■□□□ 1.45
Tdp1Q8BJ37 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tdp1Q8BJ37 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Tdp1Q8BJ37 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.11■■□□□ 1.45
Tdp1Q8BJ37 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tdp1Q8BJ37 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.11■■□□□ 1.45
Tdp1Q8BJ37 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
Tdp1Q8BJ37 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tdp1Q8BJ37 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Tdp1Q8BJ37 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tdp1Q8BJ37 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Tdp1Q8BJ37 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Tdp1Q8BJ37 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Tdp1Q8BJ37 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Tdp1Q8BJ37 Gm13241-201ENSMUST00000094493 780 ntBASIC24.08■■□□□ 1.45
Tdp1Q8BJ37 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Tdp1Q8BJ37 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Tdp1Q8BJ37 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Tdp1Q8BJ37 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC24.08■■□□□ 1.44
Tdp1Q8BJ37 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tdp1Q8BJ37 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tdp1Q8BJ37 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.07■■□□□ 1.44
Tdp1Q8BJ37 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tdp1Q8BJ37 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tdp1Q8BJ37 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Tdp1Q8BJ37 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC24.06■■□□□ 1.44
Tdp1Q8BJ37 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.06■■□□□ 1.44
Tdp1Q8BJ37 Gm9847-201ENSMUST00000052528 599 ntBASIC24.06■■□□□ 1.44
Tdp1Q8BJ37 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tdp1Q8BJ37 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.05■■□□□ 1.44
Tdp1Q8BJ37 Gm10399-202ENSMUST00000202768 748 ntBASIC24.05■■□□□ 1.44
Tdp1Q8BJ37 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tdp1Q8BJ37 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tdp1Q8BJ37 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tdp1Q8BJ37 Gm43034-201ENSMUST00000198678 1364 ntBASIC24.04■■□□□ 1.44
Tdp1Q8BJ37 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tdp1Q8BJ37 Gm21956-201ENSMUST00000179946 522 ntBASIC24.04■■□□□ 1.44
Tdp1Q8BJ37 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tdp1Q8BJ37 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tdp1Q8BJ37 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tdp1Q8BJ37 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tdp1Q8BJ37 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
Tdp1Q8BJ37 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.04■■□□□ 1.44
Tdp1Q8BJ37 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Tdp1Q8BJ37 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Tdp1Q8BJ37 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Tdp1Q8BJ37 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Tdp1Q8BJ37 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Tdp1Q8BJ37 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tdp1Q8BJ37 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tdp1Q8BJ37 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tdp1Q8BJ37 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tdp1Q8BJ37 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.02■■□□□ 1.44
Tdp1Q8BJ37 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.02■■□□□ 1.43
Tdp1Q8BJ37 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Tdp1Q8BJ37 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Tdp1Q8BJ37 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Tdp1Q8BJ37 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Tdp1Q8BJ37 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24■■□□□ 1.43
Tdp1Q8BJ37 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Tdp1Q8BJ37 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms