Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Pcdh20Q8BIZ0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcdh20Q8BIZ0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdh20Q8BIZ0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcdh20Q8BIZ0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh20Q8BIZ0 Gm44428-201ENSMUST00000204474 874 ntBASIC20.97■□□□□ 0.95
Pcdh20Q8BIZ0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Pcdh20Q8BIZ0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh20Q8BIZ0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdh20Q8BIZ0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh20Q8BIZ0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.96■□□□□ 0.95
Pcdh20Q8BIZ0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Pcdh20Q8BIZ0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh20Q8BIZ0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pcdh20Q8BIZ0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh20Q8BIZ0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh20Q8BIZ0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Pcdh20Q8BIZ0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Pcdh20Q8BIZ0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdh20Q8BIZ0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.94■□□□□ 0.94
Pcdh20Q8BIZ0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh20Q8BIZ0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pcdh20Q8BIZ0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdh20Q8BIZ0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.94■□□□□ 0.94
Pcdh20Q8BIZ0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh20Q8BIZ0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh20Q8BIZ0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh20Q8BIZ0 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.93■□□□□ 0.94
Pcdh20Q8BIZ0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh20Q8BIZ0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh20Q8BIZ0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh20Q8BIZ0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh20Q8BIZ0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh20Q8BIZ0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh20Q8BIZ0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh20Q8BIZ0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh20Q8BIZ0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh20Q8BIZ0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh20Q8BIZ0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh20Q8BIZ0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pcdh20Q8BIZ0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh20Q8BIZ0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh20Q8BIZ0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdh20Q8BIZ0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdh20Q8BIZ0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh20Q8BIZ0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh20Q8BIZ0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh20Q8BIZ0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Pcdh20Q8BIZ0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.89■□□□□ 0.93
Pcdh20Q8BIZ0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh20Q8BIZ0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh20Q8BIZ0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh20Q8BIZ0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh20Q8BIZ0 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.88■□□□□ 0.93
Pcdh20Q8BIZ0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh20Q8BIZ0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh20Q8BIZ0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh20Q8BIZ0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pcdh20Q8BIZ0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh20Q8BIZ0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.87■□□□□ 0.93
Pcdh20Q8BIZ0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh20Q8BIZ0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdh20Q8BIZ0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh20Q8BIZ0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh20Q8BIZ0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh20Q8BIZ0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh20Q8BIZ0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdh20Q8BIZ0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.86■□□□□ 0.93
Pcdh20Q8BIZ0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdh20Q8BIZ0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdh20Q8BIZ0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pcdh20Q8BIZ0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh20Q8BIZ0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh20Q8BIZ0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Pcdh20Q8BIZ0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh20Q8BIZ0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdh20Q8BIZ0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh20Q8BIZ0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh20Q8BIZ0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh20Q8BIZ0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh20Q8BIZ0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh20Q8BIZ0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh20Q8BIZ0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdh20Q8BIZ0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh20Q8BIZ0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh20Q8BIZ0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh20Q8BIZ0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh20Q8BIZ0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdh20Q8BIZ0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdh20Q8BIZ0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.83■□□□□ 0.92
Pcdh20Q8BIZ0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh20Q8BIZ0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pcdh20Q8BIZ0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh20Q8BIZ0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh20Q8BIZ0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh20Q8BIZ0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh20Q8BIZ0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh20Q8BIZ0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pcdh20Q8BIZ0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh20Q8BIZ0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms