Protein–RNA interactions for Protein: Q8BH47

Sec22a, Vesicle-trafficking protein SEC22a, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22aQ8BH47 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sec22aQ8BH47 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec22aQ8BH47 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec22aQ8BH47 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.43■□□□□ 0.54
Sec22aQ8BH47 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Sec22aQ8BH47 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec22aQ8BH47 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec22aQ8BH47 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec22aQ8BH47 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec22aQ8BH47 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec22aQ8BH47 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec22aQ8BH47 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.42■□□□□ 0.54
Sec22aQ8BH47 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Sec22aQ8BH47 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sec22aQ8BH47 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sec22aQ8BH47 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec22aQ8BH47 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec22aQ8BH47 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec22aQ8BH47 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sec22aQ8BH47 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.41■□□□□ 0.54
Sec22aQ8BH47 Gm9812-201ENSMUST00000061934 968 ntBASIC18.41■□□□□ 0.54
Sec22aQ8BH47 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.41■□□□□ 0.54
Sec22aQ8BH47 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sec22aQ8BH47 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sec22aQ8BH47 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec22aQ8BH47 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec22aQ8BH47 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sec22aQ8BH47 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sec22aQ8BH47 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sec22aQ8BH47 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sec22aQ8BH47 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sec22aQ8BH47 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.39■□□□□ 0.53
Sec22aQ8BH47 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.39■□□□□ 0.53
Sec22aQ8BH47 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.39■□□□□ 0.53
Sec22aQ8BH47 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.39■□□□□ 0.53
Sec22aQ8BH47 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sec22aQ8BH47 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec22aQ8BH47 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec22aQ8BH47 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec22aQ8BH47 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec22aQ8BH47 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sec22aQ8BH47 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.38■□□□□ 0.53
Sec22aQ8BH47 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec22aQ8BH47 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sec22aQ8BH47 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sec22aQ8BH47 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sec22aQ8BH47 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec22aQ8BH47 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sec22aQ8BH47 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.37■□□□□ 0.53
Sec22aQ8BH47 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec22aQ8BH47 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec22aQ8BH47 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sec22aQ8BH47 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.37■□□□□ 0.53
Sec22aQ8BH47 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sec22aQ8BH47 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec22aQ8BH47 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Sec22aQ8BH47 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec22aQ8BH47 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sec22aQ8BH47 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec22aQ8BH47 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sec22aQ8BH47 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sec22aQ8BH47 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sec22aQ8BH47 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sec22aQ8BH47 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.36■□□□□ 0.53
Sec22aQ8BH47 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.36■□□□□ 0.53
Sec22aQ8BH47 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sec22aQ8BH47 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sec22aQ8BH47 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sec22aQ8BH47 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.35■□□□□ 0.53
Sec22aQ8BH47 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec22aQ8BH47 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sec22aQ8BH47 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec22aQ8BH47 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec22aQ8BH47 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec22aQ8BH47 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec22aQ8BH47 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec22aQ8BH47 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec22aQ8BH47 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec22aQ8BH47 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sec22aQ8BH47 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.34■□□□□ 0.53
Sec22aQ8BH47 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.34■□□□□ 0.53
Sec22aQ8BH47 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec22aQ8BH47 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec22aQ8BH47 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.34■□□□□ 0.53
Sec22aQ8BH47 Mir3960-201ENSMUST00000198213 73 ntBASIC18.34■□□□□ 0.53
Sec22aQ8BH47 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec22aQ8BH47 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.33■□□□□ 0.53
Sec22aQ8BH47 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Sec22aQ8BH47 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sec22aQ8BH47 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Sec22aQ8BH47 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sec22aQ8BH47 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sec22aQ8BH47 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec22aQ8BH47 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec22aQ8BH47 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sec22aQ8BH47 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Sec22aQ8BH47 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec22aQ8BH47 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec22aQ8BH47 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sec22aQ8BH47 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms