Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smndc1Q8BGT7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Smndc1Q8BGT7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smndc1Q8BGT7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smndc1Q8BGT7 Gm6311-201ENSMUST00000073790 878 ntBASIC20.75■□□□□ 0.91
Smndc1Q8BGT7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smndc1Q8BGT7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smndc1Q8BGT7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smndc1Q8BGT7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smndc1Q8BGT7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Smndc1Q8BGT7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smndc1Q8BGT7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smndc1Q8BGT7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smndc1Q8BGT7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Smndc1Q8BGT7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Smndc1Q8BGT7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smndc1Q8BGT7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smndc1Q8BGT7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Smndc1Q8BGT7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smndc1Q8BGT7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smndc1Q8BGT7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smndc1Q8BGT7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smndc1Q8BGT7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smndc1Q8BGT7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Smndc1Q8BGT7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smndc1Q8BGT7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smndc1Q8BGT7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smndc1Q8BGT7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.71■□□□□ 0.91
Smndc1Q8BGT7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smndc1Q8BGT7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smndc1Q8BGT7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.71■□□□□ 0.91
Smndc1Q8BGT7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smndc1Q8BGT7 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.7■□□□□ 0.91
Smndc1Q8BGT7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Smndc1Q8BGT7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smndc1Q8BGT7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smndc1Q8BGT7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smndc1Q8BGT7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smndc1Q8BGT7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smndc1Q8BGT7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Smndc1Q8BGT7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Smndc1Q8BGT7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smndc1Q8BGT7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smndc1Q8BGT7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smndc1Q8BGT7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smndc1Q8BGT7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smndc1Q8BGT7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smndc1Q8BGT7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smndc1Q8BGT7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smndc1Q8BGT7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Smndc1Q8BGT7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Smndc1Q8BGT7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smndc1Q8BGT7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smndc1Q8BGT7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smndc1Q8BGT7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smndc1Q8BGT7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smndc1Q8BGT7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smndc1Q8BGT7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smndc1Q8BGT7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smndc1Q8BGT7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smndc1Q8BGT7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Smndc1Q8BGT7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Smndc1Q8BGT7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Smndc1Q8BGT7 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.64■□□□□ 0.89
Smndc1Q8BGT7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smndc1Q8BGT7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.64■□□□□ 0.89
Smndc1Q8BGT7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Smndc1Q8BGT7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smndc1Q8BGT7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smndc1Q8BGT7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smndc1Q8BGT7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smndc1Q8BGT7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.63■□□□□ 0.89
Smndc1Q8BGT7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Smndc1Q8BGT7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smndc1Q8BGT7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smndc1Q8BGT7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smndc1Q8BGT7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smndc1Q8BGT7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smndc1Q8BGT7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smndc1Q8BGT7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Smndc1Q8BGT7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smndc1Q8BGT7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smndc1Q8BGT7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Smndc1Q8BGT7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smndc1Q8BGT7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smndc1Q8BGT7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.61■□□□□ 0.89
Smndc1Q8BGT7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Smndc1Q8BGT7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Smndc1Q8BGT7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smndc1Q8BGT7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smndc1Q8BGT7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smndc1Q8BGT7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Smndc1Q8BGT7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.6■□□□□ 0.89
Smndc1Q8BGT7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smndc1Q8BGT7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smndc1Q8BGT7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smndc1Q8BGT7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smndc1Q8BGT7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smndc1Q8BGT7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smndc1Q8BGT7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms