Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Appbp2os-202ENSMUST00000206972 447 ntBASIC34.35■■■■□ 3.09
Rpap1Q80TE0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC34.35■■■■□ 3.09
Rpap1Q80TE0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Rpap1Q80TE0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Rpap1Q80TE0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Rpap1Q80TE0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC34.34■■■■□ 3.09
Rpap1Q80TE0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Rpap1Q80TE0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Rpap1Q80TE0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC34.33■■■■□ 3.09
Rpap1Q80TE0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Rpap1Q80TE0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Rpap1Q80TE0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Rpap1Q80TE0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
Rpap1Q80TE0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
Rpap1Q80TE0 Gm27454-201ENSMUST00000185090 204 ntBASIC34.32■■■■□ 3.08
Rpap1Q80TE0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Rpap1Q80TE0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.08
Rpap1Q80TE0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC34.32■■■■□ 3.08
Rpap1Q80TE0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Rpap1Q80TE0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Rpap1Q80TE0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Rpap1Q80TE0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Rpap1Q80TE0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
Rpap1Q80TE0 Gm11847-201ENSMUST00000125165 1119 ntBASIC34.3■■■■□ 3.08
Rpap1Q80TE0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC34.3■■■■□ 3.08
Rpap1Q80TE0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC34.3■■■■□ 3.08
Rpap1Q80TE0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Rpap1Q80TE0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Rpap1Q80TE0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Rpap1Q80TE0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Rpap1Q80TE0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC34.29■■■■□ 3.08
Rpap1Q80TE0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Rpap1Q80TE0 Gm10399-202ENSMUST00000202768 748 ntBASIC34.29■■■■□ 3.08
Rpap1Q80TE0 Gm28731-201ENSMUST00000185564 1569 ntBASIC34.28■■■■□ 3.08
Rpap1Q80TE0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
Rpap1Q80TE0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC34.28■■■■□ 3.08
Rpap1Q80TE0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC34.27■■■■□ 3.08
Rpap1Q80TE0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC34.27■■■■□ 3.08
Rpap1Q80TE0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC34.27■■■■□ 3.08
Rpap1Q80TE0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Rpap1Q80TE0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
Rpap1Q80TE0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
Rpap1Q80TE0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.07
Rpap1Q80TE0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Rpap1Q80TE0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Rpap1Q80TE0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Rpap1Q80TE0 Gm8093-201ENSMUST00000128935 1892 ntBASIC34.24■■■■□ 3.07
Rpap1Q80TE0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Rpap1Q80TE0 Gm45417-201ENSMUST00000209533 758 ntBASIC34.24■■■■□ 3.07
Rpap1Q80TE0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
Rpap1Q80TE0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC34.24■■■■□ 3.07
Rpap1Q80TE0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
Rpap1Q80TE0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
Rpap1Q80TE0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC34.23■■■■□ 3.07
Rpap1Q80TE0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
Rpap1Q80TE0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC34.22■■■■□ 3.07
Rpap1Q80TE0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Rpap1Q80TE0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Rpap1Q80TE0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC34.21■■■■□ 3.07
Rpap1Q80TE0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Rpap1Q80TE0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC34.21■■■■□ 3.07
Rpap1Q80TE0 Gm12821-201ENSMUST00000120022 600 ntBASIC34.21■■■■□ 3.07
Rpap1Q80TE0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Rpap1Q80TE0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC34.19■■■■□ 3.06
Rpap1Q80TE0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC34.18■■■■□ 3.06
Rpap1Q80TE0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
Rpap1Q80TE0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Rpap1Q80TE0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC34.17■■■■□ 3.06
Rpap1Q80TE0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
Rpap1Q80TE0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Rpap1Q80TE0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC34.16■■■■□ 3.06
Rpap1Q80TE0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Rpap1Q80TE0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Rpap1Q80TE0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC34.15■■■■□ 3.06
Rpap1Q80TE0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Rpap1Q80TE0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC34.14■■■■□ 3.06
Rpap1Q80TE0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC34.14■■■■□ 3.06
Rpap1Q80TE0 Golgb1-201ENSMUST00000023534 498 ntBASIC34.14■■■■□ 3.06
Rpap1Q80TE0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
Rpap1Q80TE0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Rpap1Q80TE0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Rpap1Q80TE0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC34.14■■■■□ 3.06
Rpap1Q80TE0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Rpap1Q80TE0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Rpap1Q80TE0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC34.13■■■■□ 3.05
Rpap1Q80TE0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC34.13■■■■□ 3.05
Rpap1Q80TE0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC34.13■■■■□ 3.05
Rpap1Q80TE0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC34.13■■■■□ 3.05
Rpap1Q80TE0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC34.12■■■■□ 3.05
Rpap1Q80TE0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
Rpap1Q80TE0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Rpap1Q80TE0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Rpap1Q80TE0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC34.11■■■■□ 3.05
Rpap1Q80TE0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC34.11■■■■□ 3.05
Rpap1Q80TE0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Rpap1Q80TE0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Rpap1Q80TE0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Rpap1Q80TE0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Rpap1Q80TE0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Rpap1Q80TE0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms