Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Gm13241-201ENSMUST00000094493 780 ntBASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Gm43034-201ENSMUST00000198678 1364 ntBASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Syne1Q6ZWR6 Gm7417-201ENSMUST00000192950 473 ntBASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Slc35b2-207ENSMUST00000226086 850 ntBASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Syne1Q6ZWR6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Syne1Q6ZWR6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC7.34□□□□□ -1.24
Syne1Q6ZWR6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Syne1Q6ZWR6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC7.34□□□□□ -1.24
Syne1Q6ZWR6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Gm22238-201ENSMUST00000175222 88 ntBASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Gm2011-201ENSMUST00000203124 1263 ntBASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Nsd1-206ENSMUST00000224918 1001 ntBASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Syne1Q6ZWR6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 Gm8093-201ENSMUST00000128935 1892 ntBASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Syne1Q6ZWR6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Appbp2os-202ENSMUST00000206972 447 ntBASIC7.31□□□□□ -1.24
Syne1Q6ZWR6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms