Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx55Q6ZPL9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.11■■□□□ 1.61
Ddx55Q6ZPL9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx55Q6ZPL9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx55Q6ZPL9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx55Q6ZPL9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx55Q6ZPL9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx55Q6ZPL9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx55Q6ZPL9 Gm8093-201ENSMUST00000128935 1892 ntBASIC25.09■■□□□ 1.61
Ddx55Q6ZPL9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Ddx55Q6ZPL9 AC140930.3-201ENSMUST00000222935 274 ntBASIC25.09■■□□□ 1.61
Ddx55Q6ZPL9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx55Q6ZPL9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx55Q6ZPL9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx55Q6ZPL9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ddx55Q6ZPL9 Appbp2os-202ENSMUST00000206972 447 ntBASIC25.08■■□□□ 1.61
Ddx55Q6ZPL9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC25.08■■□□□ 1.61
Ddx55Q6ZPL9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25.08■■□□□ 1.61
Ddx55Q6ZPL9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.08■■□□□ 1.6
Ddx55Q6ZPL9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ddx55Q6ZPL9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ddx55Q6ZPL9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC25.07■■□□□ 1.6
Ddx55Q6ZPL9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx55Q6ZPL9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx55Q6ZPL9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx55Q6ZPL9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx55Q6ZPL9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx55Q6ZPL9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx55Q6ZPL9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx55Q6ZPL9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Ddx55Q6ZPL9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx55Q6ZPL9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx55Q6ZPL9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx55Q6ZPL9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC25.04■■□□□ 1.6
Ddx55Q6ZPL9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC25.04■■□□□ 1.6
Ddx55Q6ZPL9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.03■■□□□ 1.6
Ddx55Q6ZPL9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC25.03■■□□□ 1.6
Ddx55Q6ZPL9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx55Q6ZPL9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx55Q6ZPL9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC25.02■■□□□ 1.6
Ddx55Q6ZPL9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC25.02■■□□□ 1.6
Ddx55Q6ZPL9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx55Q6ZPL9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC25.02■■□□□ 1.6
Ddx55Q6ZPL9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx55Q6ZPL9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx55Q6ZPL9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Ddx55Q6ZPL9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx55Q6ZPL9 Gm12821-201ENSMUST00000120022 600 ntBASIC25.01■■□□□ 1.59
Ddx55Q6ZPL9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx55Q6ZPL9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx55Q6ZPL9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ddx55Q6ZPL9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ddx55Q6ZPL9 Gm27454-201ENSMUST00000185090 204 ntBASIC25■■□□□ 1.59
Ddx55Q6ZPL9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx55Q6ZPL9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ddx55Q6ZPL9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx55Q6ZPL9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx55Q6ZPL9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx55Q6ZPL9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx55Q6ZPL9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.97■■□□□ 1.59
Ddx55Q6ZPL9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.97■■□□□ 1.59
Ddx55Q6ZPL9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx55Q6ZPL9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx55Q6ZPL9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx55Q6ZPL9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC24.96■■□□□ 1.59
Ddx55Q6ZPL9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
Ddx55Q6ZPL9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx55Q6ZPL9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx55Q6ZPL9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Ddx55Q6ZPL9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
Ddx55Q6ZPL9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Ddx55Q6ZPL9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx55Q6ZPL9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.95■■□□□ 1.58
Ddx55Q6ZPL9 Golgb1-201ENSMUST00000023534 498 ntBASIC24.95■■□□□ 1.58
Ddx55Q6ZPL9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC24.95■■□□□ 1.58
Ddx55Q6ZPL9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx55Q6ZPL9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx55Q6ZPL9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.94■■□□□ 1.58
Ddx55Q6ZPL9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx55Q6ZPL9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx55Q6ZPL9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx55Q6ZPL9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC24.93■■□□□ 1.58
Ddx55Q6ZPL9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.93■■□□□ 1.58
Ddx55Q6ZPL9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24.93■■□□□ 1.58
Ddx55Q6ZPL9 Gm45417-201ENSMUST00000209533 758 ntBASIC24.93■■□□□ 1.58
Ddx55Q6ZPL9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx55Q6ZPL9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx55Q6ZPL9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Ddx55Q6ZPL9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx55Q6ZPL9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC24.92■■□□□ 1.58
Ddx55Q6ZPL9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Ddx55Q6ZPL9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.92■■□□□ 1.58
Ddx55Q6ZPL9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC24.92■■□□□ 1.58
Ddx55Q6ZPL9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx55Q6ZPL9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx55Q6ZPL9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Ddx55Q6ZPL9 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.91■■□□□ 1.58
Ddx55Q6ZPL9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx55Q6ZPL9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx55Q6ZPL9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 652.8 ms