Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Kdm3aQ6PCM1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Kdm3aQ6PCM1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Kdm3aQ6PCM1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Kdm3aQ6PCM1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Kdm3aQ6PCM1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Kdm3aQ6PCM1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Kdm3aQ6PCM1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Kdm3aQ6PCM1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Kdm3aQ6PCM1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Kdm3aQ6PCM1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Kdm3aQ6PCM1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Kdm3aQ6PCM1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Kdm3aQ6PCM1 Gm28536-201ENSMUST00000190971 1317 ntBASIC26.3■■□□□ 1.8
Kdm3aQ6PCM1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Kdm3aQ6PCM1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Kdm3aQ6PCM1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.29■■□□□ 1.8
Kdm3aQ6PCM1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Kdm3aQ6PCM1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.29■■□□□ 1.8
Kdm3aQ6PCM1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Kdm3aQ6PCM1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Kdm3aQ6PCM1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Kdm3aQ6PCM1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Kdm3aQ6PCM1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC26.28■■□□□ 1.8
Kdm3aQ6PCM1 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.28■■□□□ 1.8
Kdm3aQ6PCM1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC26.28■■□□□ 1.8
Kdm3aQ6PCM1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
Kdm3aQ6PCM1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Kdm3aQ6PCM1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC26.27■■□□□ 1.8
Kdm3aQ6PCM1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Kdm3aQ6PCM1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Kdm3aQ6PCM1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Kdm3aQ6PCM1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Kdm3aQ6PCM1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Kdm3aQ6PCM1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Kdm3aQ6PCM1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Kdm3aQ6PCM1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Kdm3aQ6PCM1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC26.25■■□□□ 1.79
Kdm3aQ6PCM1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Kdm3aQ6PCM1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Kdm3aQ6PCM1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kdm3aQ6PCM1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kdm3aQ6PCM1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kdm3aQ6PCM1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kdm3aQ6PCM1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC26.23■■□□□ 1.79
Kdm3aQ6PCM1 Gm11847-201ENSMUST00000125165 1119 ntBASIC26.23■■□□□ 1.79
Kdm3aQ6PCM1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Kdm3aQ6PCM1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
Kdm3aQ6PCM1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Kdm3aQ6PCM1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Kdm3aQ6PCM1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
Kdm3aQ6PCM1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Kdm3aQ6PCM1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Kdm3aQ6PCM1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Kdm3aQ6PCM1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
Kdm3aQ6PCM1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Kdm3aQ6PCM1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Kdm3aQ6PCM1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Kdm3aQ6PCM1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26.2■■□□□ 1.79
Kdm3aQ6PCM1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Kdm3aQ6PCM1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Kdm3aQ6PCM1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Kdm3aQ6PCM1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Kdm3aQ6PCM1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Kdm3aQ6PCM1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Kdm3aQ6PCM1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.19■■□□□ 1.78
Kdm3aQ6PCM1 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.19■■□□□ 1.78
Kdm3aQ6PCM1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Kdm3aQ6PCM1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Kdm3aQ6PCM1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Kdm3aQ6PCM1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
Kdm3aQ6PCM1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Kdm3aQ6PCM1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Kdm3aQ6PCM1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Kdm3aQ6PCM1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Kdm3aQ6PCM1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Kdm3aQ6PCM1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Kdm3aQ6PCM1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Kdm3aQ6PCM1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Kdm3aQ6PCM1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Kdm3aQ6PCM1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC26.15■■□□□ 1.78
Kdm3aQ6PCM1 Rps24-207ENSMUST00000224568 714 ntBASIC26.15■■□□□ 1.78
Kdm3aQ6PCM1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Kdm3aQ6PCM1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC26.14■■□□□ 1.78
Kdm3aQ6PCM1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Kdm3aQ6PCM1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC26.14■■□□□ 1.78
Kdm3aQ6PCM1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Kdm3aQ6PCM1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Kdm3aQ6PCM1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Kdm3aQ6PCM1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC26.14■■□□□ 1.77
Kdm3aQ6PCM1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Kdm3aQ6PCM1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Kdm3aQ6PCM1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Kdm3aQ6PCM1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Kdm3aQ6PCM1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC26.13■■□□□ 1.77
Kdm3aQ6PCM1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Kdm3aQ6PCM1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Kdm3aQ6PCM1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Kdm3aQ6PCM1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Kdm3aQ6PCM1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms