Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ltn1Q6A009 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Ltn1Q6A009 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ltn1Q6A009 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC26.35■■□□□ 1.81
Ltn1Q6A009 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ltn1Q6A009 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ltn1Q6A009 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ltn1Q6A009 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ltn1Q6A009 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ltn1Q6A009 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ltn1Q6A009 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ltn1Q6A009 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC26.33■■□□□ 1.81
Ltn1Q6A009 Gm9847-201ENSMUST00000052528 599 ntBASIC26.33■■□□□ 1.8
Ltn1Q6A009 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC26.32■■□□□ 1.8
Ltn1Q6A009 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC26.32■■□□□ 1.8
Ltn1Q6A009 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ltn1Q6A009 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.32■■□□□ 1.8
Ltn1Q6A009 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.32■■□□□ 1.8
Ltn1Q6A009 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.31■■□□□ 1.8
Ltn1Q6A009 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ltn1Q6A009 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ltn1Q6A009 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ltn1Q6A009 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ltn1Q6A009 Gm11847-201ENSMUST00000125165 1119 ntBASIC26.3■■□□□ 1.8
Ltn1Q6A009 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC26.3■■□□□ 1.8
Ltn1Q6A009 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ltn1Q6A009 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ltn1Q6A009 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC26.3■■□□□ 1.8
Ltn1Q6A009 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ltn1Q6A009 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ltn1Q6A009 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ltn1Q6A009 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC26.29■■□□□ 1.8
Ltn1Q6A009 Gm10399-202ENSMUST00000202768 748 ntBASIC26.29■■□□□ 1.8
Ltn1Q6A009 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ltn1Q6A009 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
Ltn1Q6A009 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ltn1Q6A009 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ltn1Q6A009 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ltn1Q6A009 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC26.28■■□□□ 1.8
Ltn1Q6A009 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ltn1Q6A009 Gm12922-201ENSMUST00000120626 809 ntBASIC26.28■■□□□ 1.8
Ltn1Q6A009 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC26.28■■□□□ 1.8
Ltn1Q6A009 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ltn1Q6A009 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ltn1Q6A009 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ltn1Q6A009 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ltn1Q6A009 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ltn1Q6A009 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ltn1Q6A009 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ltn1Q6A009 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ltn1Q6A009 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ltn1Q6A009 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.24■■□□□ 1.79
Ltn1Q6A009 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ltn1Q6A009 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Ltn1Q6A009 Gm8093-201ENSMUST00000128935 1892 ntBASIC26.23■■□□□ 1.79
Ltn1Q6A009 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ltn1Q6A009 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ltn1Q6A009 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ltn1Q6A009 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ltn1Q6A009 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ltn1Q6A009 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.23■■□□□ 1.79
Ltn1Q6A009 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ltn1Q6A009 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Ltn1Q6A009 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Ltn1Q6A009 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ltn1Q6A009 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC26.22■■□□□ 1.79
Ltn1Q6A009 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ltn1Q6A009 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Ltn1Q6A009 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC26.2■■□□□ 1.78
Ltn1Q6A009 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Ltn1Q6A009 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ltn1Q6A009 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ltn1Q6A009 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ltn1Q6A009 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ltn1Q6A009 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC26.18■■□□□ 1.78
Ltn1Q6A009 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ltn1Q6A009 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC26.18■■□□□ 1.78
Ltn1Q6A009 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC26.18■■□□□ 1.78
Ltn1Q6A009 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Ltn1Q6A009 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ltn1Q6A009 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Ltn1Q6A009 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC26.16■■□□□ 1.78
Ltn1Q6A009 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ltn1Q6A009 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ltn1Q6A009 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ltn1Q6A009 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ltn1Q6A009 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ltn1Q6A009 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ltn1Q6A009 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ltn1Q6A009 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ltn1Q6A009 Gm27454-201ENSMUST00000185090 204 ntBASIC26.13■■□□□ 1.77
Ltn1Q6A009 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ltn1Q6A009 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ltn1Q6A009 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Ltn1Q6A009 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ltn1Q6A009 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
Ltn1Q6A009 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Ltn1Q6A009 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ltn1Q6A009 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ltn1Q6A009 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 418.7 ms