Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VcanQ62059 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VcanQ62059 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VcanQ62059 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VcanQ62059 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.85■□□□□ 0.93
VcanQ62059 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VcanQ62059 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VcanQ62059 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.84■□□□□ 0.93
VcanQ62059 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
VcanQ62059 Gm7291-201ENSMUST00000199147 382 ntBASIC20.84■□□□□ 0.93
VcanQ62059 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VcanQ62059 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
VcanQ62059 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VcanQ62059 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VcanQ62059 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VcanQ62059 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VcanQ62059 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VcanQ62059 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
VcanQ62059 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VcanQ62059 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VcanQ62059 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VcanQ62059 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
VcanQ62059 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VcanQ62059 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VcanQ62059 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VcanQ62059 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VcanQ62059 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VcanQ62059 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
VcanQ62059 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VcanQ62059 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
VcanQ62059 Gm26571-201ENSMUST00000181399 666 ntBASIC20.81■□□□□ 0.92
VcanQ62059 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VcanQ62059 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VcanQ62059 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VcanQ62059 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VcanQ62059 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VcanQ62059 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VcanQ62059 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VcanQ62059 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
VcanQ62059 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.8■□□□□ 0.92
VcanQ62059 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VcanQ62059 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VcanQ62059 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VcanQ62059 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VcanQ62059 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
VcanQ62059 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
VcanQ62059 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VcanQ62059 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VcanQ62059 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VcanQ62059 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.79■□□□□ 0.92
VcanQ62059 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.79■□□□□ 0.92
VcanQ62059 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VcanQ62059 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VcanQ62059 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.79■□□□□ 0.92
VcanQ62059 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.79■□□□□ 0.92
VcanQ62059 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VcanQ62059 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
VcanQ62059 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VcanQ62059 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.78■□□□□ 0.92
VcanQ62059 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.77■□□□□ 0.92
VcanQ62059 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VcanQ62059 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VcanQ62059 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.77■□□□□ 0.92
VcanQ62059 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VcanQ62059 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VcanQ62059 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.77■□□□□ 0.91
VcanQ62059 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VcanQ62059 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VcanQ62059 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
VcanQ62059 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VcanQ62059 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VcanQ62059 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
VcanQ62059 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VcanQ62059 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VcanQ62059 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VcanQ62059 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VcanQ62059 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VcanQ62059 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VcanQ62059 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VcanQ62059 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.75■□□□□ 0.91
VcanQ62059 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
VcanQ62059 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VcanQ62059 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
VcanQ62059 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.74■□□□□ 0.91
VcanQ62059 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VcanQ62059 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VcanQ62059 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VcanQ62059 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.74■□□□□ 0.91
VcanQ62059 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.74■□□□□ 0.91
VcanQ62059 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.74■□□□□ 0.91
VcanQ62059 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.74■□□□□ 0.91
VcanQ62059 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VcanQ62059 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VcanQ62059 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.73■□□□□ 0.91
VcanQ62059 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.73■□□□□ 0.91
VcanQ62059 Spcs1-204ENSMUST00000226782 949 ntBASIC20.73■□□□□ 0.91
VcanQ62059 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VcanQ62059 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.73■□□□□ 0.91
VcanQ62059 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VcanQ62059 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms