Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clns1aQ61189 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clns1aQ61189 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.38■□□□□ 0.53
Clns1aQ61189 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.38■□□□□ 0.53
Clns1aQ61189 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clns1aQ61189 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clns1aQ61189 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Clns1aQ61189 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clns1aQ61189 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clns1aQ61189 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clns1aQ61189 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clns1aQ61189 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clns1aQ61189 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clns1aQ61189 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clns1aQ61189 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clns1aQ61189 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Clns1aQ61189 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clns1aQ61189 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clns1aQ61189 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clns1aQ61189 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Clns1aQ61189 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Clns1aQ61189 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clns1aQ61189 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Clns1aQ61189 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.36■□□□□ 0.53
Clns1aQ61189 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Clns1aQ61189 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clns1aQ61189 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clns1aQ61189 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.35■□□□□ 0.53
Clns1aQ61189 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clns1aQ61189 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clns1aQ61189 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clns1aQ61189 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clns1aQ61189 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clns1aQ61189 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clns1aQ61189 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Clns1aQ61189 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clns1aQ61189 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clns1aQ61189 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clns1aQ61189 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clns1aQ61189 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clns1aQ61189 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clns1aQ61189 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Clns1aQ61189 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clns1aQ61189 Gm22567-201ENSMUST00000175542 342 ntBASIC18.33■□□□□ 0.52
Clns1aQ61189 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Clns1aQ61189 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.33■□□□□ 0.52
Clns1aQ61189 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clns1aQ61189 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clns1aQ61189 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.33■□□□□ 0.52
Clns1aQ61189 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Clns1aQ61189 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clns1aQ61189 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.32■□□□□ 0.52
Clns1aQ61189 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clns1aQ61189 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Clns1aQ61189 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clns1aQ61189 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.31■□□□□ 0.52
Clns1aQ61189 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clns1aQ61189 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clns1aQ61189 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.31■□□□□ 0.52
Clns1aQ61189 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clns1aQ61189 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clns1aQ61189 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Clns1aQ61189 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.3■□□□□ 0.52
Clns1aQ61189 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Clns1aQ61189 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clns1aQ61189 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.3■□□□□ 0.52
Clns1aQ61189 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Clns1aQ61189 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clns1aQ61189 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clns1aQ61189 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clns1aQ61189 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clns1aQ61189 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clns1aQ61189 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clns1aQ61189 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clns1aQ61189 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Clns1aQ61189 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Clns1aQ61189 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Clns1aQ61189 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clns1aQ61189 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.28■□□□□ 0.52
Clns1aQ61189 Notumos-201ENSMUST00000151998 2659 ntBASIC18.28■□□□□ 0.52
Clns1aQ61189 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clns1aQ61189 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clns1aQ61189 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clns1aQ61189 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Clns1aQ61189 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clns1aQ61189 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clns1aQ61189 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clns1aQ61189 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clns1aQ61189 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clns1aQ61189 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clns1aQ61189 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Clns1aQ61189 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clns1aQ61189 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Clns1aQ61189 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.26■□□□□ 0.51
Clns1aQ61189 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clns1aQ61189 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clns1aQ61189 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.26■□□□□ 0.51
Clns1aQ61189 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clns1aQ61189 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clns1aQ61189 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms