Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Shroom1Q5SX79 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Shroom1Q5SX79 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Shroom1Q5SX79 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Shroom1Q5SX79 Gm17641-201ENSMUST00000166328 2350 ntBASIC23■■□□□ 1.27
Shroom1Q5SX79 Gm15039-201ENSMUST00000118914 875 ntBASIC23■■□□□ 1.27
Shroom1Q5SX79 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Shroom1Q5SX79 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Shroom1Q5SX79 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Shroom1Q5SX79 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Shroom1Q5SX79 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Shroom1Q5SX79 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Shroom1Q5SX79 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.99■■□□□ 1.27
Shroom1Q5SX79 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Shroom1Q5SX79 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Shroom1Q5SX79 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.99■■□□□ 1.27
Shroom1Q5SX79 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Shroom1Q5SX79 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
Shroom1Q5SX79 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
Shroom1Q5SX79 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Shroom1Q5SX79 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Shroom1Q5SX79 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Shroom1Q5SX79 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Shroom1Q5SX79 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Shroom1Q5SX79 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Shroom1Q5SX79 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Shroom1Q5SX79 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Shroom1Q5SX79 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.97■■□□□ 1.27
Shroom1Q5SX79 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
Shroom1Q5SX79 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Shroom1Q5SX79 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Shroom1Q5SX79 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Shroom1Q5SX79 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Shroom1Q5SX79 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Shroom1Q5SX79 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Shroom1Q5SX79 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Shroom1Q5SX79 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Shroom1Q5SX79 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.95■■□□□ 1.27
Shroom1Q5SX79 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Shroom1Q5SX79 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Shroom1Q5SX79 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Shroom1Q5SX79 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Shroom1Q5SX79 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Shroom1Q5SX79 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.95■■□□□ 1.26
Shroom1Q5SX79 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Shroom1Q5SX79 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.94■■□□□ 1.26
Shroom1Q5SX79 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Shroom1Q5SX79 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Shroom1Q5SX79 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.94■■□□□ 1.26
Shroom1Q5SX79 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.94■■□□□ 1.26
Shroom1Q5SX79 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.94■■□□□ 1.26
Shroom1Q5SX79 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Shroom1Q5SX79 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Shroom1Q5SX79 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Shroom1Q5SX79 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Shroom1Q5SX79 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Shroom1Q5SX79 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Shroom1Q5SX79 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Shroom1Q5SX79 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.92■■□□□ 1.26
Shroom1Q5SX79 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Shroom1Q5SX79 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Shroom1Q5SX79 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Shroom1Q5SX79 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom1Q5SX79 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom1Q5SX79 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.91■■□□□ 1.26
Shroom1Q5SX79 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.91■■□□□ 1.26
Shroom1Q5SX79 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom1Q5SX79 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Shroom1Q5SX79 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.9■■□□□ 1.26
Shroom1Q5SX79 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Shroom1Q5SX79 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom1Q5SX79 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom1Q5SX79 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Shroom1Q5SX79 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.9■■□□□ 1.26
Shroom1Q5SX79 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom1Q5SX79 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom1Q5SX79 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.9■■□□□ 1.26
Shroom1Q5SX79 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Shroom1Q5SX79 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom1Q5SX79 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Shroom1Q5SX79 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Shroom1Q5SX79 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Shroom1Q5SX79 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Shroom1Q5SX79 Etf1-202ENSMUST00000180351 108 ntBASIC22.89■■□□□ 1.25
Shroom1Q5SX79 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.89■■□□□ 1.25
Shroom1Q5SX79 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Shroom1Q5SX79 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.25
Shroom1Q5SX79 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Shroom1Q5SX79 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom1Q5SX79 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Shroom1Q5SX79 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom1Q5SX79 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom1Q5SX79 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Shroom1Q5SX79 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Shroom1Q5SX79 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom1Q5SX79 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.87■■□□□ 1.25
Shroom1Q5SX79 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom1Q5SX79 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom1Q5SX79 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shroom1Q5SX79 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms