Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
R3hdm4Q4VBF2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
R3hdm4Q4VBF2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
R3hdm4Q4VBF2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
R3hdm4Q4VBF2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
R3hdm4Q4VBF2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
R3hdm4Q4VBF2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
R3hdm4Q4VBF2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
R3hdm4Q4VBF2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
R3hdm4Q4VBF2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
R3hdm4Q4VBF2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
R3hdm4Q4VBF2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
R3hdm4Q4VBF2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
R3hdm4Q4VBF2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.44■■□□□ 1.34
R3hdm4Q4VBF2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
R3hdm4Q4VBF2 Gm13238-201ENSMUST00000117655 780 ntBASIC23.44■■□□□ 1.34
R3hdm4Q4VBF2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
R3hdm4Q4VBF2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
R3hdm4Q4VBF2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
R3hdm4Q4VBF2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.43■■□□□ 1.34
R3hdm4Q4VBF2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.43■■□□□ 1.34
R3hdm4Q4VBF2 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.43■■□□□ 1.34
R3hdm4Q4VBF2 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.43■■□□□ 1.34
R3hdm4Q4VBF2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
R3hdm4Q4VBF2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.42■■□□□ 1.34
R3hdm4Q4VBF2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
R3hdm4Q4VBF2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
R3hdm4Q4VBF2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.41■■□□□ 1.34
R3hdm4Q4VBF2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
R3hdm4Q4VBF2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
R3hdm4Q4VBF2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
R3hdm4Q4VBF2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.41■■□□□ 1.34
R3hdm4Q4VBF2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
R3hdm4Q4VBF2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
R3hdm4Q4VBF2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
R3hdm4Q4VBF2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
R3hdm4Q4VBF2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
R3hdm4Q4VBF2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.39■■□□□ 1.34
R3hdm4Q4VBF2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
R3hdm4Q4VBF2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.39■■□□□ 1.34
R3hdm4Q4VBF2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
R3hdm4Q4VBF2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.39■■□□□ 1.33
R3hdm4Q4VBF2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.39■■□□□ 1.33
R3hdm4Q4VBF2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
R3hdm4Q4VBF2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
R3hdm4Q4VBF2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
R3hdm4Q4VBF2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
R3hdm4Q4VBF2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.38■■□□□ 1.33
R3hdm4Q4VBF2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.38■■□□□ 1.33
R3hdm4Q4VBF2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
R3hdm4Q4VBF2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
R3hdm4Q4VBF2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
R3hdm4Q4VBF2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
R3hdm4Q4VBF2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
R3hdm4Q4VBF2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
R3hdm4Q4VBF2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.37■■□□□ 1.33
R3hdm4Q4VBF2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.37■■□□□ 1.33
R3hdm4Q4VBF2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
R3hdm4Q4VBF2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
R3hdm4Q4VBF2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
R3hdm4Q4VBF2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.36■■□□□ 1.33
R3hdm4Q4VBF2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
R3hdm4Q4VBF2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
R3hdm4Q4VBF2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
R3hdm4Q4VBF2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
R3hdm4Q4VBF2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
R3hdm4Q4VBF2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
R3hdm4Q4VBF2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
R3hdm4Q4VBF2 Gm45444-201ENSMUST00000211394 898 ntBASIC23.35■■□□□ 1.33
R3hdm4Q4VBF2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
R3hdm4Q4VBF2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.35■■□□□ 1.33
R3hdm4Q4VBF2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
R3hdm4Q4VBF2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
R3hdm4Q4VBF2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
R3hdm4Q4VBF2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.35■■□□□ 1.33
R3hdm4Q4VBF2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
R3hdm4Q4VBF2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.34■■□□□ 1.33
R3hdm4Q4VBF2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
R3hdm4Q4VBF2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
R3hdm4Q4VBF2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
R3hdm4Q4VBF2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
R3hdm4Q4VBF2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
R3hdm4Q4VBF2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
R3hdm4Q4VBF2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
R3hdm4Q4VBF2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
R3hdm4Q4VBF2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
R3hdm4Q4VBF2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
R3hdm4Q4VBF2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms