Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Znf48Q3US17 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Znf48Q3US17 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Znf48Q3US17 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Znf48Q3US17 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.61■□□□□ 0.41
Znf48Q3US17 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Znf48Q3US17 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Znf48Q3US17 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Znf48Q3US17 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Znf48Q3US17 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Znf48Q3US17 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Znf48Q3US17 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Znf48Q3US17 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Znf48Q3US17 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.6■□□□□ 0.41
Znf48Q3US17 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Znf48Q3US17 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Znf48Q3US17 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Znf48Q3US17 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Znf48Q3US17 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Znf48Q3US17 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Znf48Q3US17 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Znf48Q3US17 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Znf48Q3US17 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Znf48Q3US17 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.58■□□□□ 0.4
Znf48Q3US17 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.58■□□□□ 0.4
Znf48Q3US17 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.58■□□□□ 0.4
Znf48Q3US17 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Znf48Q3US17 Gm45444-201ENSMUST00000211394 898 ntBASIC17.58■□□□□ 0.4
Znf48Q3US17 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Znf48Q3US17 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.58■□□□□ 0.4
Znf48Q3US17 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Znf48Q3US17 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Znf48Q3US17 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Znf48Q3US17 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Znf48Q3US17 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Znf48Q3US17 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Znf48Q3US17 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Znf48Q3US17 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.57■□□□□ 0.4
Znf48Q3US17 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Znf48Q3US17 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Znf48Q3US17 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Znf48Q3US17 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Znf48Q3US17 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Znf48Q3US17 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Znf48Q3US17 Gm9959-201ENSMUST00000068277 390 ntBASIC17.56■□□□□ 0.4
Znf48Q3US17 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Znf48Q3US17 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Znf48Q3US17 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Znf48Q3US17 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Znf48Q3US17 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf48Q3US17 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf48Q3US17 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf48Q3US17 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.55■□□□□ 0.4
Znf48Q3US17 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf48Q3US17 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Znf48Q3US17 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf48Q3US17 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Znf48Q3US17 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.54■□□□□ 0.4
Znf48Q3US17 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf48Q3US17 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf48Q3US17 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf48Q3US17 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Znf48Q3US17 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf48Q3US17 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Znf48Q3US17 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Znf48Q3US17 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Znf48Q3US17 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf48Q3US17 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf48Q3US17 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf48Q3US17 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Znf48Q3US17 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.53■□□□□ 0.4
Znf48Q3US17 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf48Q3US17 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Znf48Q3US17 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf48Q3US17 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Znf48Q3US17 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Znf48Q3US17 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Znf48Q3US17 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Znf48Q3US17 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Znf48Q3US17 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.52■□□□□ 0.4
Znf48Q3US17 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Znf48Q3US17 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Znf48Q3US17 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Znf48Q3US17 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Znf48Q3US17 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Znf48Q3US17 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.51■□□□□ 0.39
Znf48Q3US17 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.51■□□□□ 0.39
Znf48Q3US17 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Znf48Q3US17 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Znf48Q3US17 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.51■□□□□ 0.39
Znf48Q3US17 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Znf48Q3US17 Notumos-201ENSMUST00000151998 2659 ntBASIC17.51■□□□□ 0.39
Znf48Q3US17 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Znf48Q3US17 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Znf48Q3US17 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Znf48Q3US17 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Znf48Q3US17 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Znf48Q3US17 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Znf48Q3US17 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Znf48Q3US17 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms