Protein–RNA interactions for Protein: Q3ULM0

Ccdc106, Coiled-coil domain-containing protein 106, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc106Q3ULM0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc106Q3ULM0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc106Q3ULM0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc106Q3ULM0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc106Q3ULM0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc106Q3ULM0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc106Q3ULM0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc106Q3ULM0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc106Q3ULM0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc106Q3ULM0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ccdc106Q3ULM0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ccdc106Q3ULM0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc106Q3ULM0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
Ccdc106Q3ULM0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc106Q3ULM0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc106Q3ULM0 Gm5812-201ENSMUST00000061073 957 ntBASIC19.71■□□□□ 0.75
Ccdc106Q3ULM0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc106Q3ULM0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc106Q3ULM0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc106Q3ULM0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc106Q3ULM0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc106Q3ULM0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc106Q3ULM0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc106Q3ULM0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.69■□□□□ 0.74
Ccdc106Q3ULM0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc106Q3ULM0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc106Q3ULM0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc106Q3ULM0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc106Q3ULM0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc106Q3ULM0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.68■□□□□ 0.74
Ccdc106Q3ULM0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc106Q3ULM0 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.67■□□□□ 0.74
Ccdc106Q3ULM0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.67■□□□□ 0.74
Ccdc106Q3ULM0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc106Q3ULM0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc106Q3ULM0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ccdc106Q3ULM0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc106Q3ULM0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc106Q3ULM0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc106Q3ULM0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.66■□□□□ 0.74
Ccdc106Q3ULM0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc106Q3ULM0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc106Q3ULM0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc106Q3ULM0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc106Q3ULM0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccdc106Q3ULM0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc106Q3ULM0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.65■□□□□ 0.74
Ccdc106Q3ULM0 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.65■□□□□ 0.74
Ccdc106Q3ULM0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc106Q3ULM0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc106Q3ULM0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc106Q3ULM0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc106Q3ULM0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc106Q3ULM0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc106Q3ULM0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc106Q3ULM0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc106Q3ULM0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc106Q3ULM0 Gm15546-201ENSMUST00000122095 826 ntBASIC19.63■□□□□ 0.73
Ccdc106Q3ULM0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc106Q3ULM0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc106Q3ULM0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc106Q3ULM0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc106Q3ULM0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.62■□□□□ 0.73
Ccdc106Q3ULM0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.62■□□□□ 0.73
Ccdc106Q3ULM0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc106Q3ULM0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc106Q3ULM0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc106Q3ULM0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc106Q3ULM0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc106Q3ULM0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc106Q3ULM0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc106Q3ULM0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc106Q3ULM0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc106Q3ULM0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc106Q3ULM0 Gm15820-201ENSMUST00000201566 728 ntBASIC19.61■□□□□ 0.73
Ccdc106Q3ULM0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Ccdc106Q3ULM0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc106Q3ULM0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc106Q3ULM0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc106Q3ULM0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc106Q3ULM0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc106Q3ULM0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc106Q3ULM0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc106Q3ULM0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc106Q3ULM0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc106Q3ULM0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms