Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Carmil3Q3UFQ8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Carmil3Q3UFQ8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.39■■□□□ 1.81
Carmil3Q3UFQ8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.38■■□□□ 1.81
Carmil3Q3UFQ8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Carmil3Q3UFQ8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Carmil3Q3UFQ8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Carmil3Q3UFQ8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Carmil3Q3UFQ8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC26.36■■□□□ 1.81
Carmil3Q3UFQ8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Carmil3Q3UFQ8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Carmil3Q3UFQ8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Carmil3Q3UFQ8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC26.35■■□□□ 1.81
Carmil3Q3UFQ8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC26.35■■□□□ 1.81
Carmil3Q3UFQ8 Gm28536-201ENSMUST00000190971 1317 ntBASIC26.35■■□□□ 1.81
Carmil3Q3UFQ8 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.35■■□□□ 1.81
Carmil3Q3UFQ8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Carmil3Q3UFQ8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Carmil3Q3UFQ8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC26.34■■□□□ 1.81
Carmil3Q3UFQ8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC26.34■■□□□ 1.81
Carmil3Q3UFQ8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.34■■□□□ 1.81
Carmil3Q3UFQ8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Carmil3Q3UFQ8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Carmil3Q3UFQ8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.8
Carmil3Q3UFQ8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC26.33■■□□□ 1.8
Carmil3Q3UFQ8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Carmil3Q3UFQ8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Carmil3Q3UFQ8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
Carmil3Q3UFQ8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Carmil3Q3UFQ8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Carmil3Q3UFQ8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Carmil3Q3UFQ8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC26.31■■□□□ 1.8
Carmil3Q3UFQ8 Nsd1-206ENSMUST00000224918 1001 ntBASIC26.31■■□□□ 1.8
Carmil3Q3UFQ8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Carmil3Q3UFQ8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Carmil3Q3UFQ8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Carmil3Q3UFQ8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC26.29■■□□□ 1.8
Carmil3Q3UFQ8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Carmil3Q3UFQ8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Carmil3Q3UFQ8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Carmil3Q3UFQ8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Carmil3Q3UFQ8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Carmil3Q3UFQ8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Carmil3Q3UFQ8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Carmil3Q3UFQ8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Carmil3Q3UFQ8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Carmil3Q3UFQ8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Carmil3Q3UFQ8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC26.28■■□□□ 1.8
Carmil3Q3UFQ8 Gm40881-201ENSMUST00000223397 166 ntBASIC26.28■■□□□ 1.8
Carmil3Q3UFQ8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Carmil3Q3UFQ8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Carmil3Q3UFQ8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Carmil3Q3UFQ8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Carmil3Q3UFQ8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Carmil3Q3UFQ8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Carmil3Q3UFQ8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC26.26■■□□□ 1.79
Carmil3Q3UFQ8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Carmil3Q3UFQ8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Carmil3Q3UFQ8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Carmil3Q3UFQ8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Carmil3Q3UFQ8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Carmil3Q3UFQ8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.25■■□□□ 1.79
Carmil3Q3UFQ8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Carmil3Q3UFQ8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Carmil3Q3UFQ8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Carmil3Q3UFQ8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC26.24■■□□□ 1.79
Carmil3Q3UFQ8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.24■■□□□ 1.79
Carmil3Q3UFQ8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Carmil3Q3UFQ8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC26.24■■□□□ 1.79
Carmil3Q3UFQ8 Gm13241-201ENSMUST00000094493 780 ntBASIC26.23■■□□□ 1.79
Carmil3Q3UFQ8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Carmil3Q3UFQ8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Carmil3Q3UFQ8 Gm22238-201ENSMUST00000175222 88 ntBASIC26.22■■□□□ 1.79
Carmil3Q3UFQ8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Carmil3Q3UFQ8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Carmil3Q3UFQ8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Carmil3Q3UFQ8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Carmil3Q3UFQ8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Carmil3Q3UFQ8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.21■■□□□ 1.79
Carmil3Q3UFQ8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Carmil3Q3UFQ8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Carmil3Q3UFQ8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Carmil3Q3UFQ8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Carmil3Q3UFQ8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC26.2■■□□□ 1.79
Carmil3Q3UFQ8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
Carmil3Q3UFQ8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Carmil3Q3UFQ8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Carmil3Q3UFQ8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Carmil3Q3UFQ8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC26.2■■□□□ 1.79
Carmil3Q3UFQ8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Carmil3Q3UFQ8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.2■■□□□ 1.78
Carmil3Q3UFQ8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Carmil3Q3UFQ8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Carmil3Q3UFQ8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Carmil3Q3UFQ8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Carmil3Q3UFQ8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Carmil3Q3UFQ8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Carmil3Q3UFQ8 Gm11847-201ENSMUST00000125165 1119 ntBASIC26.19■■□□□ 1.78
Carmil3Q3UFQ8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC26.19■■□□□ 1.78
Carmil3Q3UFQ8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms