Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.98■□□□□ 0.47
SgcaP82350 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SgcaP82350 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.97■□□□□ 0.47
SgcaP82350 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SgcaP82350 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SgcaP82350 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SgcaP82350 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SgcaP82350 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SgcaP82350 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SgcaP82350 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SgcaP82350 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.96■□□□□ 0.47
SgcaP82350 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SgcaP82350 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.96■□□□□ 0.47
SgcaP82350 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SgcaP82350 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SgcaP82350 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SgcaP82350 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SgcaP82350 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SgcaP82350 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SgcaP82350 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SgcaP82350 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SgcaP82350 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
SgcaP82350 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
SgcaP82350 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SgcaP82350 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcaP82350 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcaP82350 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcaP82350 Nkain2-201ENSMUST00000092602 558 ntBASIC17.95■□□□□ 0.46
SgcaP82350 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcaP82350 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SgcaP82350 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SgcaP82350 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SgcaP82350 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SgcaP82350 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SgcaP82350 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SgcaP82350 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SgcaP82350 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SgcaP82350 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
SgcaP82350 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SgcaP82350 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcaP82350 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcaP82350 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcaP82350 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcaP82350 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcaP82350 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcaP82350 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcaP82350 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcaP82350 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcaP82350 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SgcaP82350 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcaP82350 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.92■□□□□ 0.46
SgcaP82350 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.92■□□□□ 0.46
SgcaP82350 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.92■□□□□ 0.46
SgcaP82350 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcaP82350 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcaP82350 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SgcaP82350 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcaP82350 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.91■□□□□ 0.46
SgcaP82350 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SgcaP82350 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SgcaP82350 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcaP82350 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcaP82350 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SgcaP82350 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SgcaP82350 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SgcaP82350 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SgcaP82350 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SgcaP82350 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SgcaP82350 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SgcaP82350 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SgcaP82350 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SgcaP82350 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SgcaP82350 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
SgcaP82350 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
SgcaP82350 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.89■□□□□ 0.45
SgcaP82350 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
SgcaP82350 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcaP82350 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SgcaP82350 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcaP82350 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcaP82350 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.88■□□□□ 0.45
SgcaP82350 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SgcaP82350 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SgcaP82350 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcaP82350 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcaP82350 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcaP82350 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcaP82350 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcaP82350 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.87■□□□□ 0.45
SgcaP82350 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcaP82350 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcaP82350 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SgcaP82350 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcaP82350 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcaP82350 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.86■□□□□ 0.45
SgcaP82350 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcaP82350 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SgcaP82350 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcaP82350 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcaP82350 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms