Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh5P55284 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh5P55284 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.9■□□□□ 0.94
Cdh5P55284 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cdh5P55284 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh5P55284 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh5P55284 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh5P55284 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh5P55284 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh5P55284 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.89■□□□□ 0.93
Cdh5P55284 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh5P55284 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh5P55284 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh5P55284 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh5P55284 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh5P55284 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh5P55284 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh5P55284 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh5P55284 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh5P55284 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.88■□□□□ 0.93
Cdh5P55284 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cdh5P55284 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.88■□□□□ 0.93
Cdh5P55284 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.88■□□□□ 0.93
Cdh5P55284 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cdh5P55284 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh5P55284 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cdh5P55284 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cdh5P55284 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.87■□□□□ 0.93
Cdh5P55284 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.87■□□□□ 0.93
Cdh5P55284 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh5P55284 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.87■□□□□ 0.93
Cdh5P55284 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh5P55284 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cdh5P55284 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh5P55284 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh5P55284 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.87■□□□□ 0.93
Cdh5P55284 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.87■□□□□ 0.93
Cdh5P55284 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh5P55284 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh5P55284 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh5P55284 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh5P55284 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh5P55284 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cdh5P55284 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh5P55284 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh5P55284 Gm7332-201ENSMUST00000118351 454 ntBASIC20.85■□□□□ 0.93
Cdh5P55284 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.85■□□□□ 0.93
Cdh5P55284 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh5P55284 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh5P55284 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh5P55284 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh5P55284 Gm14523-201ENSMUST00000117260 558 ntBASIC20.84■□□□□ 0.93
Cdh5P55284 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.84■□□□□ 0.93
Cdh5P55284 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh5P55284 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh5P55284 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh5P55284 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh5P55284 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh5P55284 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh5P55284 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cdh5P55284 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Cdh5P55284 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Cdh5P55284 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cdh5P55284 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh5P55284 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh5P55284 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cdh5P55284 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.81■□□□□ 0.92
Cdh5P55284 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cdh5P55284 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Cdh5P55284 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh5P55284 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh5P55284 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh5P55284 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh5P55284 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh5P55284 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh5P55284 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh5P55284 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Cdh5P55284 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.79■□□□□ 0.92
Cdh5P55284 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.79■□□□□ 0.92
Cdh5P55284 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Cdh5P55284 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh5P55284 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh5P55284 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh5P55284 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh5P55284 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh5P55284 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.78■□□□□ 0.92
Cdh5P55284 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh5P55284 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh5P55284 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh5P55284 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Cdh5P55284 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh5P55284 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh5P55284 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh5P55284 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cdh5P55284 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.76■□□□□ 0.91
Cdh5P55284 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.76■□□□□ 0.91
Cdh5P55284 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh5P55284 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.76■□□□□ 0.91
Cdh5P55284 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.76■□□□□ 0.91
Cdh5P55284 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms