Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hist1h1dP43277 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h1dP43277 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.28■□□□□ 0.52
Hist1h1dP43277 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Hist1h1dP43277 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hist1h1dP43277 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hist1h1dP43277 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Hist1h1dP43277 Gm7432-201ENSMUST00000210343 879 ntBASIC18.28■□□□□ 0.52
Hist1h1dP43277 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h1dP43277 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h1dP43277 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h1dP43277 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h1dP43277 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Hist1h1dP43277 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h1dP43277 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h1dP43277 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h1dP43277 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h1dP43277 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hist1h1dP43277 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.27■□□□□ 0.51
Hist1h1dP43277 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hist1h1dP43277 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h1dP43277 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h1dP43277 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h1dP43277 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h1dP43277 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h1dP43277 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist1h1dP43277 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.26■□□□□ 0.51
Hist1h1dP43277 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.26■□□□□ 0.51
Hist1h1dP43277 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Hist1h1dP43277 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Hist1h1dP43277 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h1dP43277 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h1dP43277 Gm11599-201ENSMUST00000118720 878 ntBASIC18.24■□□□□ 0.51
Hist1h1dP43277 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.24■□□□□ 0.51
Hist1h1dP43277 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h1dP43277 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.24■□□□□ 0.51
Hist1h1dP43277 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist1h1dP43277 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.24■□□□□ 0.51
Hist1h1dP43277 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h1dP43277 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h1dP43277 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h1dP43277 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h1dP43277 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.23■□□□□ 0.51
Hist1h1dP43277 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h1dP43277 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
Hist1h1dP43277 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hist1h1dP43277 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hist1h1dP43277 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist1h1dP43277 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Hist1h1dP43277 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.22■□□□□ 0.51
Hist1h1dP43277 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h1dP43277 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.21■□□□□ 0.51
Hist1h1dP43277 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h1dP43277 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h1dP43277 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h1dP43277 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.21■□□□□ 0.51
Hist1h1dP43277 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h1dP43277 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.21■□□□□ 0.51
Hist1h1dP43277 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist1h1dP43277 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Hist1h1dP43277 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h1dP43277 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Hist1h1dP43277 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h1dP43277 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h1dP43277 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Hist1h1dP43277 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Hist1h1dP43277 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h1dP43277 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist1h1dP43277 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.2■□□□□ 0.5
Hist1h1dP43277 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h1dP43277 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h1dP43277 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hist1h1dP43277 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist1h1dP43277 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h1dP43277 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h1dP43277 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hist1h1dP43277 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hist1h1dP43277 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.18■□□□□ 0.5
Hist1h1dP43277 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist1h1dP43277 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hist1h1dP43277 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hist1h1dP43277 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hist1h1dP43277 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hist1h1dP43277 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.17■□□□□ 0.5
Hist1h1dP43277 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hist1h1dP43277 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hist1h1dP43277 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.17■□□□□ 0.5
Hist1h1dP43277 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hist1h1dP43277 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hist1h1dP43277 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hist1h1dP43277 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hist1h1dP43277 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hist1h1dP43277 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Hist1h1dP43277 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hist1h1dP43277 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hist1h1dP43277 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hist1h1dP43277 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.16■□□□□ 0.5
Hist1h1dP43277 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hist1h1dP43277 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hist1h1dP43277 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms