Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdx2P43241 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cdx2P43241 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cdx2P43241 Gm10399-202ENSMUST00000202768 748 ntBASIC20.81■□□□□ 0.92
Cdx2P43241 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdx2P43241 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdx2P43241 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdx2P43241 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdx2P43241 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdx2P43241 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdx2P43241 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdx2P43241 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdx2P43241 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdx2P43241 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdx2P43241 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdx2P43241 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.78■□□□□ 0.92
Cdx2P43241 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdx2P43241 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.78■□□□□ 0.92
Cdx2P43241 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdx2P43241 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdx2P43241 Gm12922-201ENSMUST00000120626 809 ntBASIC20.78■□□□□ 0.92
Cdx2P43241 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.78■□□□□ 0.92
Cdx2P43241 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdx2P43241 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdx2P43241 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.78■□□□□ 0.92
Cdx2P43241 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdx2P43241 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdx2P43241 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdx2P43241 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Cdx2P43241 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.77■□□□□ 0.92
Cdx2P43241 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cdx2P43241 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cdx2P43241 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.77■□□□□ 0.91
Cdx2P43241 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdx2P43241 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.76■□□□□ 0.91
Cdx2P43241 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cdx2P43241 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cdx2P43241 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdx2P43241 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cdx2P43241 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cdx2P43241 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.75■□□□□ 0.91
Cdx2P43241 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdx2P43241 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdx2P43241 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdx2P43241 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cdx2P43241 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdx2P43241 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdx2P43241 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdx2P43241 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdx2P43241 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdx2P43241 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cdx2P43241 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdx2P43241 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cdx2P43241 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdx2P43241 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdx2P43241 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdx2P43241 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdx2P43241 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdx2P43241 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdx2P43241 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.71■□□□□ 0.91
Cdx2P43241 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdx2P43241 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdx2P43241 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Cdx2P43241 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdx2P43241 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdx2P43241 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdx2P43241 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.7■□□□□ 0.9
Cdx2P43241 Serp2-204ENSMUST00000228055 705 ntBASIC20.7■□□□□ 0.9
Cdx2P43241 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.69■□□□□ 0.9
Cdx2P43241 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdx2P43241 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdx2P43241 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdx2P43241 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.69■□□□□ 0.9
Cdx2P43241 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdx2P43241 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.69■□□□□ 0.9
Cdx2P43241 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdx2P43241 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdx2P43241 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdx2P43241 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.68■□□□□ 0.9
Cdx2P43241 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdx2P43241 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdx2P43241 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cdx2P43241 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.67■□□□□ 0.9
Cdx2P43241 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.67■□□□□ 0.9
Cdx2P43241 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.67■□□□□ 0.9
Cdx2P43241 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdx2P43241 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdx2P43241 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.67■□□□□ 0.9
Cdx2P43241 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdx2P43241 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdx2P43241 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdx2P43241 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Cdx2P43241 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdx2P43241 Gm12821-201ENSMUST00000120022 600 ntBASIC20.66■□□□□ 0.9
Cdx2P43241 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdx2P43241 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdx2P43241 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.65■□□□□ 0.9
Cdx2P43241 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdx2P43241 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdx2P43241 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms