Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.62■□□□□ 0.89
Cdh4P39038 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh4P39038 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh4P39038 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh4P39038 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cdh4P39038 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh4P39038 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.61■□□□□ 0.89
Cdh4P39038 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cdh4P39038 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.61■□□□□ 0.89
Cdh4P39038 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh4P39038 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh4P39038 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.6■□□□□ 0.89
Cdh4P39038 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh4P39038 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.6■□□□□ 0.89
Cdh4P39038 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.6■□□□□ 0.89
Cdh4P39038 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh4P39038 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdh4P39038 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh4P39038 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh4P39038 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh4P39038 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh4P39038 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.58■□□□□ 0.89
Cdh4P39038 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh4P39038 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cdh4P39038 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.58■□□□□ 0.89
Cdh4P39038 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.58■□□□□ 0.89
Cdh4P39038 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdh4P39038 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh4P39038 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh4P39038 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh4P39038 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh4P39038 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh4P39038 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh4P39038 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh4P39038 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.57■□□□□ 0.88
Cdh4P39038 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdh4P39038 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh4P39038 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.57■□□□□ 0.88
Cdh4P39038 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh4P39038 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh4P39038 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cdh4P39038 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh4P39038 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh4P39038 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Cdh4P39038 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cdh4P39038 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh4P39038 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh4P39038 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh4P39038 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh4P39038 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh4P39038 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh4P39038 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh4P39038 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh4P39038 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cdh4P39038 Gm45444-201ENSMUST00000211394 898 ntBASIC20.55■□□□□ 0.88
Cdh4P39038 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cdh4P39038 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh4P39038 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh4P39038 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cdh4P39038 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh4P39038 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.54■□□□□ 0.88
Cdh4P39038 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh4P39038 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh4P39038 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh4P39038 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh4P39038 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cdh4P39038 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdh4P39038 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cdh4P39038 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh4P39038 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh4P39038 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cdh4P39038 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh4P39038 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh4P39038 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Cdh4P39038 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh4P39038 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh4P39038 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cdh4P39038 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cdh4P39038 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Cdh4P39038 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Cdh4P39038 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Cdh4P39038 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh4P39038 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh4P39038 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cdh4P39038 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh4P39038 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh4P39038 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh4P39038 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh4P39038 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cdh4P39038 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cdh4P39038 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh4P39038 Gm43566-201ENSMUST00000196851 808 ntBASIC20.5■□□□□ 0.87
Cdh4P39038 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh4P39038 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh4P39038 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh4P39038 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh4P39038 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.5■□□□□ 0.87
Cdh4P39038 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh4P39038 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh4P39038 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms