Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sod1P08228 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Sod1P08228 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sod1P08228 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Sod1P08228 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sod1P08228 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.74■□□□□ 0.91
Sod1P08228 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sod1P08228 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sod1P08228 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.74■□□□□ 0.91
Sod1P08228 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sod1P08228 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sod1P08228 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sod1P08228 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sod1P08228 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sod1P08228 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sod1P08228 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sod1P08228 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sod1P08228 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sod1P08228 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sod1P08228 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sod1P08228 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sod1P08228 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sod1P08228 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.72■□□□□ 0.91
Sod1P08228 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sod1P08228 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sod1P08228 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Sod1P08228 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.71■□□□□ 0.91
Sod1P08228 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sod1P08228 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.71■□□□□ 0.91
Sod1P08228 Gm13241-201ENSMUST00000094493 780 ntBASIC20.71■□□□□ 0.91
Sod1P08228 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sod1P08228 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sod1P08228 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Sod1P08228 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sod1P08228 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.7■□□□□ 0.9
Sod1P08228 Gm10399-202ENSMUST00000202768 748 ntBASIC20.7■□□□□ 0.9
Sod1P08228 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sod1P08228 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.69■□□□□ 0.9
Sod1P08228 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sod1P08228 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Sod1P08228 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sod1P08228 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.69■□□□□ 0.9
Sod1P08228 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sod1P08228 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Sod1P08228 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.68■□□□□ 0.9
Sod1P08228 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sod1P08228 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sod1P08228 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sod1P08228 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sod1P08228 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sod1P08228 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sod1P08228 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sod1P08228 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sod1P08228 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sod1P08228 Gm21956-201ENSMUST00000179946 522 ntBASIC20.66■□□□□ 0.9
Sod1P08228 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sod1P08228 Gm9847-201ENSMUST00000052528 599 ntBASIC20.66■□□□□ 0.9
Sod1P08228 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sod1P08228 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sod1P08228 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sod1P08228 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sod1P08228 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sod1P08228 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sod1P08228 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sod1P08228 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.65■□□□□ 0.9
Sod1P08228 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sod1P08228 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sod1P08228 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sod1P08228 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sod1P08228 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sod1P08228 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sod1P08228 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sod1P08228 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Sod1P08228 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.64■□□□□ 0.89
Sod1P08228 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sod1P08228 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sod1P08228 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sod1P08228 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sod1P08228 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sod1P08228 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sod1P08228 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sod1P08228 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sod1P08228 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sod1P08228 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sod1P08228 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sod1P08228 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.61■□□□□ 0.89
Sod1P08228 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sod1P08228 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sod1P08228 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sod1P08228 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.61■□□□□ 0.89
Sod1P08228 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.61■□□□□ 0.89
Sod1P08228 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sod1P08228 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sod1P08228 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sod1P08228 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sod1P08228 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sod1P08228 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sod1P08228 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sod1P08228 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sod1P08228 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms