Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.81■□□□□ 0.92
P04213 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
P04213 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04213 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
P04213 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
P04213 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04213 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04213 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04213 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04213 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
P04213 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04213 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.79■□□□□ 0.92
P04213 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
P04213 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04213 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.79■□□□□ 0.92
P04213 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04213 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
P04213 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04213 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P04213 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04213 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.78■□□□□ 0.92
P04213 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04213 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04213 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04213 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04213 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04213 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
P04213 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
P04213 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04213 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.77■□□□□ 0.92
P04213 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04213 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04213 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
P04213 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04213 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
P04213 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04213 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04213 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P04213 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
P04213 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.75■□□□□ 0.91
P04213 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.75■□□□□ 0.91
P04213 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
P04213 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P04213 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
P04213 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P04213 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.74■□□□□ 0.91
P04213 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P04213 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04213 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.74■□□□□ 0.91
P04213 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
P04213 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
P04213 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04213 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
P04213 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
P04213 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
P04213 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.72■□□□□ 0.91
P04213 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P04213 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
P04213 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P04213 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P04213 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P04213 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.7■□□□□ 0.9
P04213 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P04213 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P04213 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P04213 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P04213 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04213 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
P04213 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04213 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
P04213 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04213 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04213 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
P04213 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04213 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
P04213 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
P04213 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P04213 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
P04213 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P04213 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
P04213 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P04213 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04213 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.67■□□□□ 0.9
P04213 Gm14523-201ENSMUST00000117260 558 ntBASIC20.67■□□□□ 0.9
P04213 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
P04213 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04213 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
P04213 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
P04213 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
P04213 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P04213 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P04213 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.66■□□□□ 0.9
P04213 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P04213 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
P04213 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P04213 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
P04213 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
P04213 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.65■□□□□ 0.9
P04213 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
P04213 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms