Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NgfP01139 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.38■□□□□ 0.69
NgfP01139 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NgfP01139 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NgfP01139 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NgfP01139 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NgfP01139 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NgfP01139 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NgfP01139 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NgfP01139 Gm10399-202ENSMUST00000202768 748 ntBASIC19.36■□□□□ 0.69
NgfP01139 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NgfP01139 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NgfP01139 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NgfP01139 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.35■□□□□ 0.69
NgfP01139 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NgfP01139 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.35■□□□□ 0.69
NgfP01139 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NgfP01139 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.35■□□□□ 0.69
NgfP01139 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NgfP01139 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NgfP01139 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NgfP01139 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NgfP01139 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NgfP01139 Gm22238-201ENSMUST00000175222 88 ntBASIC19.34■□□□□ 0.69
NgfP01139 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NgfP01139 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NgfP01139 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NgfP01139 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NgfP01139 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NgfP01139 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.33■□□□□ 0.69
NgfP01139 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NgfP01139 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.33■□□□□ 0.68
NgfP01139 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.33■□□□□ 0.68
NgfP01139 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NgfP01139 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NgfP01139 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NgfP01139 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.32■□□□□ 0.68
NgfP01139 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NgfP01139 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NgfP01139 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NgfP01139 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.32■□□□□ 0.68
NgfP01139 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NgfP01139 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NgfP01139 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NgfP01139 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NgfP01139 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.31■□□□□ 0.68
NgfP01139 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.31■□□□□ 0.68
NgfP01139 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NgfP01139 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NgfP01139 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NgfP01139 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NgfP01139 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NgfP01139 Gm13241-201ENSMUST00000094493 780 ntBASIC19.3■□□□□ 0.68
NgfP01139 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NgfP01139 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NgfP01139 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NgfP01139 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NgfP01139 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NgfP01139 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NgfP01139 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NgfP01139 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NgfP01139 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NgfP01139 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NgfP01139 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NgfP01139 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NgfP01139 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.28■□□□□ 0.68
NgfP01139 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NgfP01139 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NgfP01139 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NgfP01139 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NgfP01139 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NgfP01139 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NgfP01139 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NgfP01139 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NgfP01139 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NgfP01139 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NgfP01139 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NgfP01139 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NgfP01139 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NgfP01139 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NgfP01139 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NgfP01139 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NgfP01139 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NgfP01139 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NgfP01139 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NgfP01139 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.25■□□□□ 0.67
NgfP01139 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NgfP01139 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NgfP01139 Gm9847-201ENSMUST00000052528 599 ntBASIC19.25■□□□□ 0.67
NgfP01139 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.25■□□□□ 0.67
NgfP01139 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NgfP01139 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NgfP01139 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NgfP01139 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NgfP01139 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NgfP01139 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.24■□□□□ 0.67
NgfP01139 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NgfP01139 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NgfP01139 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NgfP01139 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms