Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Mtco1P00397 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Mtco1P00397 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Mtco1P00397 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Mtco1P00397 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Mtco1P00397 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Mtco1P00397 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.79■■□□□ 1.4
Mtco1P00397 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Mtco1P00397 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.78■■□□□ 1.4
Mtco1P00397 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Mtco1P00397 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mtco1P00397 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Mtco1P00397 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mtco1P00397 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mtco1P00397 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.78■■□□□ 1.4
Mtco1P00397 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Mtco1P00397 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.77■■□□□ 1.4
Mtco1P00397 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Mtco1P00397 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.77■■□□□ 1.4
Mtco1P00397 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Mtco1P00397 Gm7417-201ENSMUST00000192950 473 ntBASIC23.76■■□□□ 1.39
Mtco1P00397 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.76■■□□□ 1.39
Mtco1P00397 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.76■■□□□ 1.39
Mtco1P00397 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Mtco1P00397 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Mtco1P00397 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Mtco1P00397 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.75■■□□□ 1.39
Mtco1P00397 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
Mtco1P00397 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Mtco1P00397 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Mtco1P00397 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Mtco1P00397 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Mtco1P00397 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.74■■□□□ 1.39
Mtco1P00397 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Mtco1P00397 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
Mtco1P00397 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Mtco1P00397 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Mtco1P00397 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Mtco1P00397 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Mtco1P00397 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Mtco1P00397 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.73■■□□□ 1.39
Mtco1P00397 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Mtco1P00397 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.73■■□□□ 1.39
Mtco1P00397 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Mtco1P00397 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.72■■□□□ 1.39
Mtco1P00397 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.72■■□□□ 1.39
Mtco1P00397 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.72■■□□□ 1.39
Mtco1P00397 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.72■■□□□ 1.39
Mtco1P00397 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Mtco1P00397 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.72■■□□□ 1.39
Mtco1P00397 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Mtco1P00397 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Mtco1P00397 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Mtco1P00397 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Mtco1P00397 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Mtco1P00397 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Mtco1P00397 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.71■■□□□ 1.39
Mtco1P00397 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Mtco1P00397 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.7■■□□□ 1.38
Mtco1P00397 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Mtco1P00397 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Mtco1P00397 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Mtco1P00397 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Mtco1P00397 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.7■■□□□ 1.38
Mtco1P00397 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Mtco1P00397 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Mtco1P00397 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.7■■□□□ 1.38
Mtco1P00397 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Mtco1P00397 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Mtco1P00397 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Mtco1P00397 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.69■■□□□ 1.38
Mtco1P00397 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.69■■□□□ 1.38
Mtco1P00397 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Mtco1P00397 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Mtco1P00397 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.68■■□□□ 1.38
Mtco1P00397 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.68■■□□□ 1.38
Mtco1P00397 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.68■■□□□ 1.38
Mtco1P00397 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Mtco1P00397 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.67■■□□□ 1.38
Mtco1P00397 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Mtco1P00397 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.67■■□□□ 1.38
Mtco1P00397 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Mtco1P00397 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.66■■□□□ 1.38
Mtco1P00397 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Mtco1P00397 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Mtco1P00397 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Mtco1P00397 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.66■■□□□ 1.38
Mtco1P00397 Gm40881-201ENSMUST00000223397 166 ntBASIC23.66■■□□□ 1.38
Mtco1P00397 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Mtco1P00397 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Mtco1P00397 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Mtco1P00397 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.66■■□□□ 1.38
Mtco1P00397 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Mtco1P00397 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Mtco1P00397 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Mtco1P00397 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Mtco1P00397 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Mtco1P00397 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Mtco1P00397 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.65■■□□□ 1.38
Mtco1P00397 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms