Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Best1O88870 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Best1O88870 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best1O88870 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best1O88870 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Best1O88870 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best1O88870 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best1O88870 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Best1O88870 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Best1O88870 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.98■□□□□ 0.95
Best1O88870 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Best1O88870 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Best1O88870 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Best1O88870 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.97■□□□□ 0.95
Best1O88870 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.97■□□□□ 0.95
Best1O88870 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Best1O88870 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Best1O88870 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.96■□□□□ 0.95
Best1O88870 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Best1O88870 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Best1O88870 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.96■□□□□ 0.95
Best1O88870 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Best1O88870 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Best1O88870 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Best1O88870 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Best1O88870 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Best1O88870 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.95■□□□□ 0.94
Best1O88870 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Best1O88870 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Best1O88870 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Best1O88870 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Best1O88870 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best1O88870 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best1O88870 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Best1O88870 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best1O88870 Gm45102-201ENSMUST00000207427 857 ntBASIC20.94■□□□□ 0.94
Best1O88870 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.94■□□□□ 0.94
Best1O88870 Rps24-207ENSMUST00000224568 714 ntBASIC20.94■□□□□ 0.94
Best1O88870 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best1O88870 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best1O88870 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Best1O88870 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Best1O88870 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Best1O88870 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Best1O88870 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Best1O88870 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Best1O88870 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Best1O88870 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Best1O88870 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Best1O88870 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Best1O88870 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Best1O88870 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Best1O88870 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Best1O88870 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.91■□□□□ 0.94
Best1O88870 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.91■□□□□ 0.94
Best1O88870 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.91■□□□□ 0.94
Best1O88870 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Best1O88870 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Best1O88870 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best1O88870 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best1O88870 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Best1O88870 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Best1O88870 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best1O88870 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best1O88870 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.9■□□□□ 0.94
Best1O88870 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best1O88870 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.9■□□□□ 0.94
Best1O88870 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best1O88870 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best1O88870 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Best1O88870 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Best1O88870 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Best1O88870 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Best1O88870 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Best1O88870 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Best1O88870 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Best1O88870 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.88■□□□□ 0.93
Best1O88870 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Best1O88870 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.88■□□□□ 0.93
Best1O88870 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Best1O88870 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.88■□□□□ 0.93
Best1O88870 Gm9959-201ENSMUST00000068277 390 ntBASIC20.88■□□□□ 0.93
Best1O88870 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Best1O88870 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Best1O88870 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Best1O88870 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Best1O88870 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Best1O88870 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.87■□□□□ 0.93
Best1O88870 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best1O88870 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best1O88870 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best1O88870 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best1O88870 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best1O88870 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best1O88870 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best1O88870 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best1O88870 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best1O88870 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Best1O88870 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best1O88870 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms