Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1bO55017 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Cacna1bO55017 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1bO55017 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cacna1bO55017 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cacna1bO55017 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1bO55017 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cacna1bO55017 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1bO55017 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1bO55017 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.05■□□□□ 0.96
Cacna1bO55017 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.05■□□□□ 0.96
Cacna1bO55017 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cacna1bO55017 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.04■□□□□ 0.96
Cacna1bO55017 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.04■□□□□ 0.96
Cacna1bO55017 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacna1bO55017 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Cacna1bO55017 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cacna1bO55017 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.04■□□□□ 0.96
Cacna1bO55017 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1bO55017 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1bO55017 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1bO55017 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1bO55017 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1bO55017 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1bO55017 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1bO55017 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cacna1bO55017 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Cacna1bO55017 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cacna1bO55017 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cacna1bO55017 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1bO55017 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1bO55017 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1bO55017 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1bO55017 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1bO55017 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1bO55017 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1bO55017 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cacna1bO55017 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cacna1bO55017 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cacna1bO55017 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21■□□□□ 0.95
Cacna1bO55017 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cacna1bO55017 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cacna1bO55017 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21■□□□□ 0.95
Cacna1bO55017 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cacna1bO55017 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cacna1bO55017 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cacna1bO55017 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1bO55017 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cacna1bO55017 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1bO55017 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1bO55017 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1bO55017 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1bO55017 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1bO55017 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1bO55017 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1bO55017 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1bO55017 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1bO55017 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1bO55017 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.98■□□□□ 0.95
Cacna1bO55017 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1bO55017 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1bO55017 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.98■□□□□ 0.95
Cacna1bO55017 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1bO55017 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1bO55017 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1bO55017 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.96■□□□□ 0.95
Cacna1bO55017 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1bO55017 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1bO55017 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1bO55017 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1bO55017 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1bO55017 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1bO55017 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1bO55017 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1bO55017 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1bO55017 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.95■□□□□ 0.94
Cacna1bO55017 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1bO55017 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1bO55017 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.94■□□□□ 0.94
Cacna1bO55017 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1bO55017 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Cacna1bO55017 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1bO55017 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1bO55017 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1bO55017 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cacna1bO55017 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1bO55017 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1bO55017 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1bO55017 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.93■□□□□ 0.94
Cacna1bO55017 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.93■□□□□ 0.94
Cacna1bO55017 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1bO55017 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1bO55017 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1bO55017 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1bO55017 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1bO55017 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.92■□□□□ 0.94
Cacna1bO55017 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1bO55017 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1bO55017 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Cacna1bO55017 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms