Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
DffbO54788 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DffbO54788 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DffbO54788 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
DffbO54788 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DffbO54788 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DffbO54788 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DffbO54788 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.44■□□□□ 0.54
DffbO54788 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.44■□□□□ 0.54
DffbO54788 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
DffbO54788 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DffbO54788 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DffbO54788 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DffbO54788 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DffbO54788 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
DffbO54788 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DffbO54788 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DffbO54788 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DffbO54788 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.42■□□□□ 0.54
DffbO54788 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DffbO54788 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DffbO54788 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DffbO54788 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
DffbO54788 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.42■□□□□ 0.54
DffbO54788 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.42■□□□□ 0.54
DffbO54788 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DffbO54788 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DffbO54788 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DffbO54788 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
DffbO54788 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DffbO54788 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DffbO54788 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DffbO54788 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DffbO54788 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DffbO54788 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DffbO54788 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DffbO54788 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
DffbO54788 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
DffbO54788 Notumos-201ENSMUST00000151998 2659 ntBASIC18.4■□□□□ 0.54
DffbO54788 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DffbO54788 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DffbO54788 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DffbO54788 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DffbO54788 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DffbO54788 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DffbO54788 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DffbO54788 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DffbO54788 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
DffbO54788 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
DffbO54788 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DffbO54788 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DffbO54788 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.39■□□□□ 0.53
DffbO54788 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DffbO54788 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DffbO54788 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DffbO54788 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.39■□□□□ 0.53
DffbO54788 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DffbO54788 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DffbO54788 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
DffbO54788 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
DffbO54788 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DffbO54788 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DffbO54788 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DffbO54788 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
DffbO54788 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.37■□□□□ 0.53
DffbO54788 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.37■□□□□ 0.53
DffbO54788 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.37■□□□□ 0.53
DffbO54788 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DffbO54788 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DffbO54788 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.37■□□□□ 0.53
DffbO54788 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DffbO54788 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.37■□□□□ 0.53
DffbO54788 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DffbO54788 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DffbO54788 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DffbO54788 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DffbO54788 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
DffbO54788 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DffbO54788 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.35■□□□□ 0.53
DffbO54788 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DffbO54788 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DffbO54788 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DffbO54788 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DffbO54788 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DffbO54788 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DffbO54788 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DffbO54788 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DffbO54788 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DffbO54788 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DffbO54788 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DffbO54788 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
DffbO54788 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DffbO54788 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DffbO54788 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.33■□□□□ 0.52
DffbO54788 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DffbO54788 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.33■□□□□ 0.52
DffbO54788 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DffbO54788 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DffbO54788 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.32■□□□□ 0.52
DffbO54788 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms