Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rundc3aO08576 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rundc3aO08576 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rundc3aO08576 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rundc3aO08576 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rundc3aO08576 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rundc3aO08576 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rundc3aO08576 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.02■□□□□ 0.96
Rundc3aO08576 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.02■□□□□ 0.96
Rundc3aO08576 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rundc3aO08576 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rundc3aO08576 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rundc3aO08576 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rundc3aO08576 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.01■□□□□ 0.95
Rundc3aO08576 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rundc3aO08576 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rundc3aO08576 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rundc3aO08576 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rundc3aO08576 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rundc3aO08576 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Rundc3aO08576 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rundc3aO08576 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rundc3aO08576 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rundc3aO08576 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rundc3aO08576 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rundc3aO08576 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.99■□□□□ 0.95
Rundc3aO08576 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rundc3aO08576 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.98■□□□□ 0.95
Rundc3aO08576 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rundc3aO08576 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.98■□□□□ 0.95
Rundc3aO08576 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rundc3aO08576 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rundc3aO08576 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rundc3aO08576 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Rundc3aO08576 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rundc3aO08576 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.97■□□□□ 0.95
Rundc3aO08576 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rundc3aO08576 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.97■□□□□ 0.95
Rundc3aO08576 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.97■□□□□ 0.95
Rundc3aO08576 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rundc3aO08576 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rundc3aO08576 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Rundc3aO08576 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rundc3aO08576 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Rundc3aO08576 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rundc3aO08576 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rundc3aO08576 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rundc3aO08576 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Rundc3aO08576 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Rundc3aO08576 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rundc3aO08576 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.96■□□□□ 0.95
Rundc3aO08576 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rundc3aO08576 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rundc3aO08576 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rundc3aO08576 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Rundc3aO08576 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rundc3aO08576 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.95■□□□□ 0.94
Rundc3aO08576 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.94■□□□□ 0.94
Rundc3aO08576 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rundc3aO08576 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rundc3aO08576 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rundc3aO08576 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Rundc3aO08576 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Rundc3aO08576 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rundc3aO08576 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rundc3aO08576 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.94■□□□□ 0.94
Rundc3aO08576 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rundc3aO08576 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rundc3aO08576 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rundc3aO08576 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rundc3aO08576 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.93■□□□□ 0.94
Rundc3aO08576 Scarna2-201ENSMUST00000157560 414 ntBASIC20.92■□□□□ 0.94
Rundc3aO08576 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rundc3aO08576 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rundc3aO08576 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rundc3aO08576 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rundc3aO08576 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.91■□□□□ 0.94
Rundc3aO08576 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.91■□□□□ 0.94
Rundc3aO08576 Gm16437-201ENSMUST00000025669 507 ntBASIC20.91■□□□□ 0.94
Rundc3aO08576 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rundc3aO08576 Gm9806-201ENSMUST00000051080 552 ntBASIC20.91■□□□□ 0.94
Rundc3aO08576 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rundc3aO08576 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rundc3aO08576 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rundc3aO08576 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Rundc3aO08576 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rundc3aO08576 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rundc3aO08576 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rundc3aO08576 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rundc3aO08576 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.9■□□□□ 0.94
Rundc3aO08576 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rundc3aO08576 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.9■□□□□ 0.94
Rundc3aO08576 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rundc3aO08576 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rundc3aO08576 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rundc3aO08576 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rundc3aO08576 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rundc3aO08576 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rundc3aO08576 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rundc3aO08576 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms