Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cldn20G5E8X0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn20G5E8X0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn20G5E8X0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn20G5E8X0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cldn20G5E8X0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.69■□□□□ 0.58
Cldn20G5E8X0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn20G5E8X0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn20G5E8X0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn20G5E8X0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn20G5E8X0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.68■□□□□ 0.58
Cldn20G5E8X0 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.68■□□□□ 0.58
Cldn20G5E8X0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn20G5E8X0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn20G5E8X0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn20G5E8X0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn20G5E8X0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn20G5E8X0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn20G5E8X0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.67■□□□□ 0.58
Cldn20G5E8X0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.67■□□□□ 0.58
Cldn20G5E8X0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn20G5E8X0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn20G5E8X0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cldn20G5E8X0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn20G5E8X0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn20G5E8X0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn20G5E8X0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn20G5E8X0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn20G5E8X0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cldn20G5E8X0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn20G5E8X0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn20G5E8X0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Cldn20G5E8X0 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.64■□□□□ 0.58
Cldn20G5E8X0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.64■□□□□ 0.57
Cldn20G5E8X0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn20G5E8X0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn20G5E8X0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.64■□□□□ 0.57
Cldn20G5E8X0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn20G5E8X0 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.64■□□□□ 0.57
Cldn20G5E8X0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn20G5E8X0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn20G5E8X0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn20G5E8X0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.62■□□□□ 0.57
Cldn20G5E8X0 Mir3960-201ENSMUST00000198213 73 ntBASIC18.62■□□□□ 0.57
Cldn20G5E8X0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.62■□□□□ 0.57
Cldn20G5E8X0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn20G5E8X0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn20G5E8X0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn20G5E8X0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn20G5E8X0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn20G5E8X0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Cldn20G5E8X0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn20G5E8X0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn20G5E8X0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn20G5E8X0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn20G5E8X0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cldn20G5E8X0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn20G5E8X0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn20G5E8X0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn20G5E8X0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn20G5E8X0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.6■□□□□ 0.57
Cldn20G5E8X0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn20G5E8X0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn20G5E8X0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.6■□□□□ 0.57
Cldn20G5E8X0 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.6■□□□□ 0.57
Cldn20G5E8X0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn20G5E8X0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn20G5E8X0 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.6■□□□□ 0.57
Cldn20G5E8X0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn20G5E8X0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn20G5E8X0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cldn20G5E8X0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn20G5E8X0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn20G5E8X0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn20G5E8X0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.59■□□□□ 0.57
Cldn20G5E8X0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn20G5E8X0 Gm45364-201ENSMUST00000210883 159 ntBASIC18.58■□□□□ 0.56
Cldn20G5E8X0 Gm6311-201ENSMUST00000073790 878 ntBASIC18.58■□□□□ 0.56
Cldn20G5E8X0 Iqck-206ENSMUST00000208658 2891 ntBASIC18.58■□□□□ 0.56
Cldn20G5E8X0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn20G5E8X0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.58■□□□□ 0.56
Cldn20G5E8X0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn20G5E8X0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn20G5E8X0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn20G5E8X0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn20G5E8X0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn20G5E8X0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn20G5E8X0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms