Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx6-2D3Z4R4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx6-2D3Z4R4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx6-2D3Z4R4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-2D3Z4R4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-2D3Z4R4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.57■□□□□ 0.4
Nkx6-2D3Z4R4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-2D3Z4R4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-2D3Z4R4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx6-2D3Z4R4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx6-2D3Z4R4 Particl-201ENSMUST00000205370 1560 ntBASIC17.56■□□□□ 0.4
Nkx6-2D3Z4R4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx6-2D3Z4R4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nkx6-2D3Z4R4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-2D3Z4R4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-2D3Z4R4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-2D3Z4R4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.55■□□□□ 0.4
Nkx6-2D3Z4R4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-2D3Z4R4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkx6-2D3Z4R4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-2D3Z4R4 Golph3-202ENSMUST00000226517 2359 ntBASIC17.54■□□□□ 0.4
Nkx6-2D3Z4R4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-2D3Z4R4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nkx6-2D3Z4R4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-2D3Z4R4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
Nkx6-2D3Z4R4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nkx6-2D3Z4R4 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.53■□□□□ 0.4
Nkx6-2D3Z4R4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-2D3Z4R4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
Nkx6-2D3Z4R4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-2D3Z4R4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Nkx6-2D3Z4R4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-2D3Z4R4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-2D3Z4R4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-2D3Z4R4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx6-2D3Z4R4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nkx6-2D3Z4R4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx6-2D3Z4R4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx6-2D3Z4R4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx6-2D3Z4R4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nkx6-2D3Z4R4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-2D3Z4R4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-2D3Z4R4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-2D3Z4R4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nkx6-2D3Z4R4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-2D3Z4R4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-2D3Z4R4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-2D3Z4R4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nkx6-2D3Z4R4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-2D3Z4R4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nkx6-2D3Z4R4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nkx6-2D3Z4R4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-2D3Z4R4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-2D3Z4R4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-2D3Z4R4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-2D3Z4R4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-2D3Z4R4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-2D3Z4R4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-2D3Z4R4 Gm26115-201ENSMUST00000175605 87 ntBASIC17.49■□□□□ 0.39
Nkx6-2D3Z4R4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-2D3Z4R4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-2D3Z4R4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-2D3Z4R4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nkx6-2D3Z4R4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-2D3Z4R4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-2D3Z4R4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-2D3Z4R4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-2D3Z4R4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-2D3Z4R4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-2D3Z4R4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-2D3Z4R4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-2D3Z4R4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-2D3Z4R4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-2D3Z4R4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx6-2D3Z4R4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nkx6-2D3Z4R4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-2D3Z4R4 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.46■□□□□ 0.39
Nkx6-2D3Z4R4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-2D3Z4R4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-2D3Z4R4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-2D3Z4R4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-2D3Z4R4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-2D3Z4R4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-2D3Z4R4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nkx6-2D3Z4R4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-2D3Z4R4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-2D3Z4R4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-2D3Z4R4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-2D3Z4R4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-2D3Z4R4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-2D3Z4R4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-2D3Z4R4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-2D3Z4R4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Nkx6-2D3Z4R4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-2D3Z4R4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-2D3Z4R4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx6-2D3Z4R4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Nkx6-2D3Z4R4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.43■□□□□ 0.38
Nkx6-2D3Z4R4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx6-2D3Z4R4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms