Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn2aA0A0J9YTW6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Scn2aA0A0J9YTW6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.92■□□□□ 0.78
Scn2aA0A0J9YTW6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scn2aA0A0J9YTW6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scn2aA0A0J9YTW6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Gm22567-201ENSMUST00000175542 342 ntBASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.85■□□□□ 0.77
Scn2aA0A0J9YTW6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Scn2aA0A0J9YTW6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2aA0A0J9YTW6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2aA0A0J9YTW6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2aA0A0J9YTW6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Scn2aA0A0J9YTW6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2aA0A0J9YTW6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2aA0A0J9YTW6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2aA0A0J9YTW6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2aA0A0J9YTW6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2aA0A0J9YTW6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn2aA0A0J9YTW6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.83■□□□□ 0.76
Scn2aA0A0J9YTW6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Scn2aA0A0J9YTW6 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.83■□□□□ 0.76
Scn2aA0A0J9YTW6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn2aA0A0J9YTW6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.8■□□□□ 0.76
Scn2aA0A0J9YTW6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn2aA0A0J9YTW6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 202 ms