Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn2aA0A0J9YTW6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Scn2aA0A0J9YTW6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.92■□□□□ 0.78
Scn2aA0A0J9YTW6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2aA0A0J9YTW6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2aA0A0J9YTW6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scn2aA0A0J9YTW6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scn2aA0A0J9YTW6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2aA0A0J9YTW6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2aA0A0J9YTW6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2aA0A0J9YTW6 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Gm22567-201ENSMUST00000175542 342 ntBASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2aA0A0J9YTW6 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.85■□□□□ 0.77
Scn2aA0A0J9YTW6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Scn2aA0A0J9YTW6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2aA0A0J9YTW6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2aA0A0J9YTW6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2aA0A0J9YTW6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Scn2aA0A0J9YTW6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2aA0A0J9YTW6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2aA0A0J9YTW6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2aA0A0J9YTW6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2aA0A0J9YTW6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2aA0A0J9YTW6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2aA0A0J9YTW6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn2aA0A0J9YTW6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.83■□□□□ 0.76
Scn2aA0A0J9YTW6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Scn2aA0A0J9YTW6 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.83■□□□□ 0.76
Scn2aA0A0J9YTW6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2aA0A0J9YTW6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2aA0A0J9YTW6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn2aA0A0J9YTW6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.8■□□□□ 0.76
Scn2aA0A0J9YTW6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn2aA0A0J9YTW6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms