Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.98■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.96■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Scarna2-201ENSMUST00000157560 414 ntBASIC18.94■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.93■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.93■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.93■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9806-201ENSMUST00000051080 552 ntBASIC18.93■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.93■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.93■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.92■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16437-201ENSMUST00000025669 507 ntBASIC18.92■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.89■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.88■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.86■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.85■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms