Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-4A0A0G2JG37 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav9d-4A0A0G2JG37 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-4A0A0G2JG37 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav9d-4A0A0G2JG37 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-4A0A0G2JG37 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav9d-4A0A0G2JG37 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-4A0A0G2JG37 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-4A0A0G2JG37 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-4A0A0G2JG37 Gm37136-201ENSMUST00000194368 194 ntBASIC14.72□□□□□ -0.05
Trav9d-4A0A0G2JG37 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-4A0A0G2JG37 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-4A0A0G2JG37 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-4A0A0G2JG37 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav9d-4A0A0G2JG37 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-4A0A0G2JG37 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-4A0A0G2JG37 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trav9d-4A0A0G2JG37 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav9d-4A0A0G2JG37 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-4A0A0G2JG37 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-4A0A0G2JG37 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav9d-4A0A0G2JG37 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav9d-4A0A0G2JG37 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-4A0A0G2JG37 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-4A0A0G2JG37 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-4A0A0G2JG37 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav9d-4A0A0G2JG37 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-4A0A0G2JG37 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-4A0A0G2JG37 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-4A0A0G2JG37 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav9d-4A0A0G2JG37 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-4A0A0G2JG37 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9d-4A0A0G2JG37 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav9d-4A0A0G2JG37 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9d-4A0A0G2JG37 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9d-4A0A0G2JG37 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9d-4A0A0G2JG37 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9d-4A0A0G2JG37 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav9d-4A0A0G2JG37 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9d-4A0A0G2JG37 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9d-4A0A0G2JG37 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9d-4A0A0G2JG37 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9d-4A0A0G2JG37 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav9d-4A0A0G2JG37 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Trav9d-4A0A0G2JG37 Nkain2-201ENSMUST00000092602 558 ntBASIC14.68□□□□□ -0.06
Trav9d-4A0A0G2JG37 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9d-4A0A0G2JG37 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9d-4A0A0G2JG37 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9d-4A0A0G2JG37 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9d-4A0A0G2JG37 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9d-4A0A0G2JG37 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9d-4A0A0G2JG37 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9d-4A0A0G2JG37 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9d-4A0A0G2JG37 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9d-4A0A0G2JG37 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9d-4A0A0G2JG37 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9d-4A0A0G2JG37 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9d-4A0A0G2JG37 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trav9d-4A0A0G2JG37 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9d-4A0A0G2JG37 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9d-4A0A0G2JG37 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9d-4A0A0G2JG37 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav9d-4A0A0G2JG37 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9d-4A0A0G2JG37 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9d-4A0A0G2JG37 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-4A0A0G2JG37 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav9d-4A0A0G2JG37 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav9d-4A0A0G2JG37 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-4A0A0G2JG37 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-4A0A0G2JG37 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav9d-4A0A0G2JG37 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-4A0A0G2JG37 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-4A0A0G2JG37 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-4A0A0G2JG37 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-4A0A0G2JG37 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-4A0A0G2JG37 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-4A0A0G2JG37 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-4A0A0G2JG37 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-4A0A0G2JG37 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav9d-4A0A0G2JG37 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-4A0A0G2JG37 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-4A0A0G2JG37 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.63□□□□□ -0.07
Trav9d-4A0A0G2JG37 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-4A0A0G2JG37 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-4A0A0G2JG37 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-4A0A0G2JG37 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-4A0A0G2JG37 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-4A0A0G2JG37 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Trav9d-4A0A0G2JG37 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-4A0A0G2JG37 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.62□□□□□ -0.07
Trav9d-4A0A0G2JG37 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-4A0A0G2JG37 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav9d-4A0A0G2JG37 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Trav9d-4A0A0G2JG37 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav9d-4A0A0G2JG37 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav9d-4A0A0G2JG37 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
Trav9d-4A0A0G2JG37 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-4A0A0G2JG37 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-4A0A0G2JG37 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.62□□□□□ -0.07
Trav9d-4A0A0G2JG37 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 153.1 ms