Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav3n-3A0A0G2JEM0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.23■□□□□ 0.19
Trav3n-3A0A0G2JEM0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Gm37136-201ENSMUST00000194368 194 ntBASIC16.21■□□□□ 0.19
Trav3n-3A0A0G2JEM0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav3n-3A0A0G2JEM0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.17■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav3n-3A0A0G2JEM0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.14■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.13■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav3n-3A0A0G2JEM0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav3n-3A0A0G2JEM0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.13■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav3n-3A0A0G2JEM0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms