Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-3A0A0B4J1K1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4-3A0A0B4J1K1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav4-3A0A0B4J1K1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-3A0A0B4J1K1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-3A0A0B4J1K1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.75□□□□□ -0.05
Trav4-3A0A0B4J1K1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav4-3A0A0B4J1K1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-3A0A0B4J1K1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-3A0A0B4J1K1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-3A0A0B4J1K1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.75□□□□□ -0.05
Trav4-3A0A0B4J1K1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-3A0A0B4J1K1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav4-3A0A0B4J1K1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-3A0A0B4J1K1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-3A0A0B4J1K1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-3A0A0B4J1K1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-3A0A0B4J1K1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav4-3A0A0B4J1K1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav4-3A0A0B4J1K1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-3A0A0B4J1K1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-3A0A0B4J1K1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-3A0A0B4J1K1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Trav4-3A0A0B4J1K1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-3A0A0B4J1K1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-3A0A0B4J1K1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav4-3A0A0B4J1K1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-3A0A0B4J1K1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-3A0A0B4J1K1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-3A0A0B4J1K1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav4-3A0A0B4J1K1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-3A0A0B4J1K1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-3A0A0B4J1K1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav4-3A0A0B4J1K1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Trav4-3A0A0B4J1K1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav4-3A0A0B4J1K1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-3A0A0B4J1K1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-3A0A0B4J1K1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-3A0A0B4J1K1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-3A0A0B4J1K1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Trav4-3A0A0B4J1K1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-3A0A0B4J1K1 Gm24970-201ENSMUST00000175582 82 ntBASIC14.7□□□□□ -0.06
Trav4-3A0A0B4J1K1 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.7□□□□□ -0.06
Trav4-3A0A0B4J1K1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-3A0A0B4J1K1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-3A0A0B4J1K1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4-3A0A0B4J1K1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4-3A0A0B4J1K1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4-3A0A0B4J1K1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4-3A0A0B4J1K1 Gm37136-201ENSMUST00000194368 194 ntBASIC14.69□□□□□ -0.06
Trav4-3A0A0B4J1K1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4-3A0A0B4J1K1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4-3A0A0B4J1K1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4-3A0A0B4J1K1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4-3A0A0B4J1K1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav4-3A0A0B4J1K1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav4-3A0A0B4J1K1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Trav4-3A0A0B4J1K1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4-3A0A0B4J1K1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4-3A0A0B4J1K1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4-3A0A0B4J1K1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4-3A0A0B4J1K1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav4-3A0A0B4J1K1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Trav4-3A0A0B4J1K1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav4-3A0A0B4J1K1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav4-3A0A0B4J1K1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.68□□□□□ -0.06
Trav4-3A0A0B4J1K1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav4-3A0A0B4J1K1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav4-3A0A0B4J1K1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-3A0A0B4J1K1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-3A0A0B4J1K1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-3A0A0B4J1K1 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.67□□□□□ -0.06
Trav4-3A0A0B4J1K1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-3A0A0B4J1K1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav4-3A0A0B4J1K1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav4-3A0A0B4J1K1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-3A0A0B4J1K1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-3A0A0B4J1K1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-3A0A0B4J1K1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav4-3A0A0B4J1K1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav4-3A0A0B4J1K1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-3A0A0B4J1K1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-3A0A0B4J1K1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-3A0A0B4J1K1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-3A0A0B4J1K1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-3A0A0B4J1K1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-3A0A0B4J1K1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms