Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6d-7A0A075B6B0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6d-7A0A075B6B0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6d-7A0A075B6B0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav6d-7A0A075B6B0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6d-7A0A075B6B0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Trav6d-7A0A075B6B0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6d-7A0A075B6B0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6d-7A0A075B6B0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 Gm7332-201ENSMUST00000118351 454 ntBASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6d-7A0A075B6B0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6d-7A0A075B6B0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6d-7A0A075B6B0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav6d-7A0A075B6B0 Gm27502-201ENSMUST00000183495 199 ntBASIC16.57■□□□□ 0.24
Trav6d-7A0A075B6B0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6d-7A0A075B6B0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6d-7A0A075B6B0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6d-7A0A075B6B0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav6d-7A0A075B6B0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav6d-7A0A075B6B0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6d-7A0A075B6B0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6d-7A0A075B6B0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trav6d-7A0A075B6B0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6d-7A0A075B6B0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trav6d-7A0A075B6B0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Trav6d-7A0A075B6B0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6d-7A0A075B6B0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6d-7A0A075B6B0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6d-7A0A075B6B0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Trav6d-7A0A075B6B0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6d-7A0A075B6B0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.55■□□□□ 0.24
Trav6d-7A0A075B6B0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6d-7A0A075B6B0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6d-7A0A075B6B0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6d-7A0A075B6B0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6d-7A0A075B6B0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6d-7A0A075B6B0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav6d-7A0A075B6B0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6d-7A0A075B6B0 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.53■□□□□ 0.24
Trav6d-7A0A075B6B0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-7A0A075B6B0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-7A0A075B6B0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-7A0A075B6B0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-7A0A075B6B0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-7A0A075B6B0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-7A0A075B6B0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav6d-7A0A075B6B0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-7A0A075B6B0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-7A0A075B6B0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-7A0A075B6B0 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.52■□□□□ 0.24
Trav6d-7A0A075B6B0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav6d-7A0A075B6B0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-7A0A075B6B0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-7A0A075B6B0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-7A0A075B6B0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trav6d-7A0A075B6B0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6d-7A0A075B6B0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6d-7A0A075B6B0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-7A0A075B6B0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-7A0A075B6B0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trav6d-7A0A075B6B0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-7A0A075B6B0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-7A0A075B6B0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-7A0A075B6B0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-7A0A075B6B0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-7A0A075B6B0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-7A0A075B6B0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-7A0A075B6B0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-7A0A075B6B0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-7A0A075B6B0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-7A0A075B6B0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-7A0A075B6B0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Trav6d-7A0A075B6B0 Gm14523-201ENSMUST00000117260 558 ntBASIC16.5■□□□□ 0.23
Trav6d-7A0A075B6B0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav6d-7A0A075B6B0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav6d-7A0A075B6B0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-7A0A075B6B0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6d-7A0A075B6B0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6d-7A0A075B6B0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav6d-7A0A075B6B0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6d-7A0A075B6B0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6d-7A0A075B6B0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav6d-7A0A075B6B0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6d-7A0A075B6B0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-7A0A075B6B0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-7A0A075B6B0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-7A0A075B6B0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-7A0A075B6B0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms