Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trav9d-1A0A075B699 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-1A0A075B699 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-1A0A075B699 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-1A0A075B699 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-1A0A075B699 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9d-1A0A075B699 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav9d-1A0A075B699 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.59■□□□□ 0.25
Trav9d-1A0A075B699 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9d-1A0A075B699 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.59■□□□□ 0.25
Trav9d-1A0A075B699 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9d-1A0A075B699 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9d-1A0A075B699 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav9d-1A0A075B699 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9d-1A0A075B699 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav9d-1A0A075B699 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trav9d-1A0A075B699 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav9d-1A0A075B699 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav9d-1A0A075B699 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav9d-1A0A075B699 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9d-1A0A075B699 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9d-1A0A075B699 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Trav9d-1A0A075B699 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9d-1A0A075B699 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-1A0A075B699 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-1A0A075B699 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-1A0A075B699 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9d-1A0A075B699 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9d-1A0A075B699 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trav9d-1A0A075B699 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9d-1A0A075B699 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav9d-1A0A075B699 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9d-1A0A075B699 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav9d-1A0A075B699 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav9d-1A0A075B699 Scarna2-201ENSMUST00000157560 414 ntBASIC16.56■□□□□ 0.24
Trav9d-1A0A075B699 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9d-1A0A075B699 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trav9d-1A0A075B699 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.56■□□□□ 0.24
Trav9d-1A0A075B699 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9d-1A0A075B699 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.55■□□□□ 0.24
Trav9d-1A0A075B699 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9d-1A0A075B699 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9d-1A0A075B699 Gm22567-201ENSMUST00000175542 342 ntBASIC16.55■□□□□ 0.24
Trav9d-1A0A075B699 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9d-1A0A075B699 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9d-1A0A075B699 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9d-1A0A075B699 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav9d-1A0A075B699 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav9d-1A0A075B699 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9d-1A0A075B699 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav9d-1A0A075B699 Gm16437-201ENSMUST00000025669 507 ntBASIC16.54■□□□□ 0.24
Trav9d-1A0A075B699 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9d-1A0A075B699 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9d-1A0A075B699 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9d-1A0A075B699 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9d-1A0A075B699 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9d-1A0A075B699 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9d-1A0A075B699 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trav9d-1A0A075B699 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav9d-1A0A075B699 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
Trav9d-1A0A075B699 Gm44428-201ENSMUST00000204474 874 ntBASIC16.53■□□□□ 0.24
Trav9d-1A0A075B699 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav9d-1A0A075B699 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9d-1A0A075B699 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9d-1A0A075B699 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9d-1A0A075B699 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9d-1A0A075B699 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9d-1A0A075B699 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9d-1A0A075B699 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav9d-1A0A075B699 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9d-1A0A075B699 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9d-1A0A075B699 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9d-1A0A075B699 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9d-1A0A075B699 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9d-1A0A075B699 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9d-1A0A075B699 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav9d-1A0A075B699 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav9d-1A0A075B699 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.51■□□□□ 0.23
Trav9d-1A0A075B699 Gm9806-201ENSMUST00000051080 552 ntBASIC16.51■□□□□ 0.23
Trav9d-1A0A075B699 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav9d-1A0A075B699 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9d-1A0A075B699 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Trav9d-1A0A075B699 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav9d-1A0A075B699 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9d-1A0A075B699 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9d-1A0A075B699 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9d-1A0A075B699 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trav9d-1A0A075B699 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav9d-1A0A075B699 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav9d-1A0A075B699 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav9d-1A0A075B699 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9d-1A0A075B699 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9d-1A0A075B699 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trav9d-1A0A075B699 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9d-1A0A075B699 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav9d-1A0A075B699 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-1A0A075B699 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-1A0A075B699 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-1A0A075B699 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-1A0A075B699 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms