Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav17A0A075B655 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.14■□□□□ 0.33
Trav17A0A075B655 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav17A0A075B655 Gm9812-201ENSMUST00000061934 968 ntBASIC17.14■□□□□ 0.33
Trav17A0A075B655 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav17A0A075B655 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav17A0A075B655 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.13■□□□□ 0.33
Trav17A0A075B655 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav17A0A075B655 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav17A0A075B655 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
Trav17A0A075B655 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav17A0A075B655 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav17A0A075B655 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav17A0A075B655 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav17A0A075B655 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav17A0A075B655 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav17A0A075B655 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav17A0A075B655 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav17A0A075B655 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav17A0A075B655 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav17A0A075B655 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.12■□□□□ 0.33
Trav17A0A075B655 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav17A0A075B655 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav17A0A075B655 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav17A0A075B655 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav17A0A075B655 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav17A0A075B655 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Trav17A0A075B655 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav17A0A075B655 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav17A0A075B655 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav17A0A075B655 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav17A0A075B655 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav17A0A075B655 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav17A0A075B655 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav17A0A075B655 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav17A0A075B655 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav17A0A075B655 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav17A0A075B655 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav17A0A075B655 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav17A0A075B655 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav17A0A075B655 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav17A0A075B655 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav17A0A075B655 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav17A0A075B655 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav17A0A075B655 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav17A0A075B655 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav17A0A075B655 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav17A0A075B655 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav17A0A075B655 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.08■□□□□ 0.33
Trav17A0A075B655 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.08■□□□□ 0.33
Trav17A0A075B655 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav17A0A075B655 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.08■□□□□ 0.32
Trav17A0A075B655 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav17A0A075B655 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav17A0A075B655 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav17A0A075B655 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav17A0A075B655 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav17A0A075B655 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav17A0A075B655 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav17A0A075B655 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav17A0A075B655 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav17A0A075B655 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav17A0A075B655 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav17A0A075B655 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav17A0A075B655 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav17A0A075B655 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav17A0A075B655 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav17A0A075B655 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.06■□□□□ 0.32
Trav17A0A075B655 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav17A0A075B655 Mir3960-201ENSMUST00000198213 73 ntBASIC17.06■□□□□ 0.32
Trav17A0A075B655 Terc-201ENSMUST00000082862 423 ntBASIC17.06■□□□□ 0.32
Trav17A0A075B655 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav17A0A075B655 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav17A0A075B655 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav17A0A075B655 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav17A0A075B655 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav17A0A075B655 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.05■□□□□ 0.32
Trav17A0A075B655 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav17A0A075B655 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav17A0A075B655 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav17A0A075B655 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav17A0A075B655 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Trav17A0A075B655 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav17A0A075B655 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.04■□□□□ 0.32
Trav17A0A075B655 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav17A0A075B655 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.04■□□□□ 0.32
Trav17A0A075B655 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav17A0A075B655 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav17A0A075B655 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav17A0A075B655 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav17A0A075B655 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.04■□□□□ 0.32
Trav17A0A075B655 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav17A0A075B655 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav17A0A075B655 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav17A0A075B655 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav17A0A075B655 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav17A0A075B655 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav17A0A075B655 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav17A0A075B655 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav17A0A075B655 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms